Selaginella moellendorffii: SELMODRAFT_405603
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Entry
SELMODRAFT_405603 CDS
T01496
Symbol
PFT1B-1
Name
(RefSeq) hypothetical protein
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_405603 (PFT1B-1)
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
SELMODRAFT_405603 (PFT1B-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
9654400
NCBI-ProteinID:
XP_002964016
JGI:
405603
UniProt:
D8QZ40
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MVTSSSAGPLRSGSGVTAQQPQAQYLVLAVEATAALGPSWPLLRSEYLDKLARRTMGLLW
RWRSWSFEAMIPTVVGKDFREVYPSITGCLLQRSGWTPSLELFQLWLSSIDFSGGGFGEV
AVAEGLAEALVMCCPTTQPPSNQACQRHCILVPASNPHRLQAPVPHPPLSTGADAKPDQW
WLADAETVARAFSQCHISLSVVCPRQLPSLKNLYSVAKQNPRASDPSNEIAKHTQHLVLI
SESFLEARNCLRRVIQAPALAAVSMPPSPTSVKVEQQAAAPLAVQTTQPVPATAVPSVST
GTVPTNGRQSQIMSNGSIPMSTVKIEHVSTSGPLSYGSPPMVNTSMAAVSLPIQSSGATS
DMSQDVLRPPLASDASTAVQDFKSINTNPLQSHRPWDKLVWGSHNQLVSQPAWHMDLVAM
QSVQGAGLGMPHRSIAAPSNSVGSAPNAGVMLPMSQPGQNPATGNAGVSHLVSNGVATTP
PQQPANTKYTKLWQGTLAGQRHGKPVQICSLEGYRQTSSPETYVGYRLAADNADSAFNYT
GLHEQQEGKAELLVFRPLNQHGFLQQLADKKLLPSQTLLLASADKPQRMIGMLFPESKPP
QMMPGGSQMPMVGSGGTQIPGQSYLL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgagcagcagcgcggggcctctcagaagcggctctggcgtgaccgcgcagcag
ccgcaggcgcagtatctggtgctcgcggtcgaggcgacggcggcgctaggcccgtcgtgg
ccgctgctgcgatccgagtatctcgacaagctcgccagaaggacaatggggctactctgg
agatggcgctcgtggtctttcgaggccatgattcctacagtggtaggcaaagactttaga
gaggtttatccatctatcacaggctgcctgctccagagaagtggctggacgccgagcttg
gagctgttccagctatggctatcgtccatcgatttctcgggtggtggatttggcgaagtt
gctgtggcggagggattagcggaagctcttgtgatgtgttgtcccacgactcagccgcca
agtaaccaggcatgccagagacattgtattttggtgccagcttcaaatcctcacaggctt
caagctcccgtccctcatccgcctctaagcactggcgcggacgcgaagccggaccagtgg
tggcttgcggatgctgaaaccgttgcaagggcattctctcagtgccatatatctctttca
gttgtttgtccgcggcagttaccatcgttaaagaacctgtactcagtggccaagcaaaat
cctcgagcttctgacccttcgaatgagattgccaagcacacgcagcaccttgtcttaatc
tccgagagctttttggaggccaggaattgcttgcgtcgtgtcattcaggctcctgcactt
gctgctgttagtatgccaccatcgcctacaagtgtaaaagttgagcagcaagctgctgct
cctttggcggtgcagactacacaaccagtacctgcaactgcggtgccatcagtatccact
ggcacagtgcctaccaatggaaggcaatcacagatcatgtcaaatggtagcatacccatg
tcaactgtaaagattgagcacgtctcgacctctggtccgctctcatatggctcgccgcct
atggtgaacacaagtatggcagcagtttctcttccgatacaaagctcgggggccacttca
gatatgagccaagacgttcttcgtcccccactcgcctcagacgcatcgactgctgttcag
gactttaagagcatcaacactaaccctttgcaatcgcatcgtccgtgggacaagttggta
tggggatcacacaaccagttagtcagccagccagcatggcacatggacttagtggcgatg
cagagcgtccagggtgccggacttggaatgccgcatagatcgatagcagcaccgagcaac
tctgttgggagcgctccgaatgctggtgtgatgcttccgatgtctcagcctggtcagaat
ccagcaactggcaacgctggagtatctcatctagtctcgaatggtgttgccactacacca
ccgcagcagcctgcgaatacaaagtacacgaagctctggcaggggacattggcaggccag
aggcatggaaagccagttcaaatctgtagcttggagggataccggcaaacctcgtctcct
gaaacgtacgttggctaccgattggccgctgacaatgcagatagtgcgtttaattacacg
ggactacatgagcaacaggaaggaaaggccgagcttctggttttcaggccactaaatcaa
catggattcctccagcagctcgcagataaaaaactgctcccctcgcagacgttgctgctt
gccagcgctgataaaccacagcgaatgattggaatgctgtttccagagagcaaacctccg
cagatgatgccgggtggatctcaaatgcccatggtcggctctggtggcacacaaattcca
ggacaaagttacctcctctag
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