Selaginella moellendorffii: SELMODRAFT_405855
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Entry
SELMODRAFT_405855 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_405855
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SELMODRAFT_405855
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SELMODRAFT_405855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_GRF
Exo_endo_phos
Pkinase
Motif
Other DBs
NCBI-GeneID:
9654702
NCBI-ProteinID:
XP_002964145
JGI:
405855
UniProt:
D8QZW7
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MQRRPCLYSEAAAAGEDETQPIDTDVLSSGGGDKTIPGAEMRSSDERLGSDLDYDDRSPP
PQLRSIDMLRGCRSVDEFERLNKIDEGTYGVLYRARDKKSGEIVALKRVKMVHERDGFPM
TSRKSTFFSRFTIHRSWMSRKWWSHALQRNDQCSFNASSICTTTDQALLWNLMTKKELGS
LLPQALAEPMCRSGSDASAGRERDRGGVTRWRLLRLQRVDLEAKAGTGKKPTPKQDKSNR
AAQIQAPGDSRGAKGNRDPRDLRGRLCRILKRGRRIIIVGHLNISPYPIDSCDPGPKFDT
DPSRQWFRSLLVSEGGAFSDSFRVFHPEIAEAYTCWSQASGAEEFNYGSRIDHVLIAGPC
AGHCQCPDGSHENSSCDGFAECGTDMCDILLEFKRAKLDTLPRSRSCYSALKHYLPFHHM
KLHNWLLDLCLSFALLRKVSVRNGQQETTEAVTKPIDRVLLSKHESSDKMSCTEVAVHGQ
SSSLTDEIQQSAESCDNNNCSEVAPCGESAILMDMSDETPTESSQQSLEKLAAGWERLKS
LMSRNLLSCKGHGETCVVRTVKKAGPNLGRGFYVCTRAKGPASTHKLGI
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccgcccttgtctatactccgaggcggctgctgctggagaggatgaaacacag
ccgattgacaccgatgtgctttccagcggtggtggtgacaagacaattccgggagccgag
atgaggagcagcgacgagcgcttggggtcggacttggactatgacgatcgatcgccaccc
ccacagctacgtagtattgatatgctgcgaggctgccggagcgtggacgagtttgagagg
cttaacaagatcgacgaggggacttatggagtcctctatcgtgctcgggacaagaagagt
ggagagattgtggcgctcaagagagtgaagatggtccacgagagagatggattccccatg
acttctcggaaatcaacgttcttctctcgtttcaccatccatcgatcgtggatgtcaagg
aagtggtggtctcatgccttacaaagaaatgaccagtgctctttcaatgcgtcaagtatc
tgcacgacgactgatcaagctcttttatggaacttaatgacaaagaaggagctcggatca
ctattaccgcaggcgctggcggaaccgatgtgcaggagtggaagtgatgcctctgctgga
agagaacgagatcgaggtggagtaacccgatggcgactattgagattacaacgtgtagat
ctggaggcaaaggcgggaacaggaaagaagccaactccaaaacaagataaaagcaatcgc
gctgctcaaatccaagctcctggtgattctcgaggagcaaagggcaaccgagatccaaga
gatttgaggggacgtttgtgtaggattttaaaacgaggcaggaggattattatcgtgggg
cacttgaacatttctccatatcctattgattcatgtgaccctggtccaaaatttgatacc
gatccgagccgtcaatggtttagatcattgctggtgagcgagggtggtgcgttttcagac
tcgtttcgcgtgtttcatcctgaaatagcagaggcttacacttgctggtctcaggcatcg
ggtgcggaggagtttaactatggcagtcgtattgatcatgttcttattgctggtccctgc
gctggccattgtcagtgtcctgatggatcgcatgaaaatagtagctgtgacggatttgca
gagtgtggaacagatatgtgtgacattcttctcgagtttaagcgtgcaaagctggacacc
cttccgagatcacgctcctgctattctgcgcttaagcattatcttccattccaccacatg
aagctccacaactggctgctcgatttatgcctgagctttgcgctcctcaggaaagtatca
gtaagaaacgggcagcaggaaactacagaggctgtcacaaagccgattgacagggttttg
ctatcaaagcatgaatcttctgacaaaatgagctgcacagaggttgcagtgcatgggcag
agctccagccttacggatgaaatccagcaatcagctgaatcgtgcgacaataacaactgc
tcagaggttgcaccttgcggggagagtgccattctgatggatatgtcagatgaaacaccg
acggaaagctctcagcaaagcttggaaaaattggcagcaggctgggaacgactgaagagc
ttgatgtcgcgaaatcttctatcgtgcaagggacatggtgagacttgtgtcgtgagaaca
gttaagaaggctggtcccaatcttggccgtggtttctacgtctgtactcgagcaaagggc
ccagcttccactcacaagctcgggatctga
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