Selaginella moellendorffii: SELMODRAFT_40701
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Entry
SELMODRAFT_40701 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_40701
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SELMODRAFT_40701
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SELMODRAFT_40701
Prokaryotic type
SELMODRAFT_40701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
9643911
NCBI-ProteinID:
XP_002984161
JGI:
40701
UniProt:
D8SLJ3
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
LQIFGTGMDTGETSPCVLLFFDSKRFVFNAGEGLQRFCQENKIKLSKAWNGGIIDHVLLT
RVCSETAGGLAGALLTLAGDVGLTLNIWGPSDLQCLITAMSTYLPNASFFYTHAFGKDGK
LLPEHAKDPNIAVLLEDDLVKISAVLLVPFSDEQGKKFRPGDVAVVYVCELPEVRGKFDP
VKAAALGLRPGRKYALLQSGTSVLSDDGTTEIFPESVMEPSSPGPKVILVDCPTRFHIPS
LLTANGLKGLYTSDGAASVACIVHMSPAIVVNDSKYQDWMRLFGSTEHILAGSGCSNSLS
PILKSSAKILSKLNFACPYVFPVPGYGYESSENQQILLQQQNNLSVTIAKNLLKFRLLPL
SGLGMDGSSVPEAFDGKVHTDELIECVPEILPLTEKLKEFWKAYGSKDLVEEPWFDKGAD
SRSLSSSSLTKEIPDTLKAVGRKEVELIFLGTGSSQPSTYRNVSAIYVHLFANGGMLLDC
GEGTYGQLLRRYRVFRTDSVVAGLRLIWISHIHADHHGGLSRILSVRRQLLSKSGNVEPL
LVVGPKLLKRVLEAYDMVEDLGVEFLDCSQTTLEASDIAAGGQPKGFVSSIVSGSQEGRS
GFMQWVQRGYHLRNGLDEAGRSKLQDTLKALGLSSLVSVPVIHCPHAFGVVLEAQNKADT
SKAGWKLAYSGDTRPCKAFIEASDGATVFIHEATFEDGMSEEAVSKMHSSTHEAIQAGAL
ARAYRTILTHFSQRYSKVPVFDDSYNDRTCVAFDLMSIDLVDLPLLPSLIPVLKLLFKDD
QAEEQADEE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
ctgcagatttttgggactggaatggacacgggagagacatcgccctgcgtccttctcttt
tttgatagcaagcggtttgttttcaatgctggagagggtttgcaacgtttttgtcaagag
aacaagatcaagttatctaaggcatggaacggtgggattatcgaccacgttcttcttact
cgcgtgtgttctgaaactgctggtggccttgctggggcgcttttaacactcgctggcgac
gttggcctaacgctgaacatctggggtccatcggacctgcaatgcctaataactgcgatg
tctacgtacttgccaaatgcctctttcttctatacgcatgctttcgggaaggacggcaaa
ctcttgcctgagcatgcaaaagatcccaatattgcagttctcctagaagatgatttggtg
aagatatcggcagtgttgctggttccattctcggatgagcaaggcaagaagtttagacct
ggcgatgtcgctgtagtgtatgtttgcgagcttcccgaagttagaggcaagttcgatcct
gtgaaggcagctgctttgggattgcgtccaggtcgaaagtacgctttgcttcaaagtgga
acttctgttctttcagatgatgggacaacagagatttttccggagtctgtcatggaacca
tcatccccgggcccaaaggttattcttgtggactgcccgacaaggttccatattccgtct
ctgctgacggcaaacggtttgaaaggattgtacactagcgatggcgccgcgtctgtggcg
tgcattgtacacatgagtcctgctatcgtggttaacgatagtaaataccaggattggatg
aggctttttggctcgactgaacatatactggcaggatcaggatgctctaattctctttcc
ccaattctcaagtctagcgcaaagatactttccaagctaaattttgcatgtccttatgtt
ttccctgtgcctggttacggttacgaatcatcggaaaaccagcaaatattgttgcagcag
cagaacaatttgtccgtcaccattgccaagaacttgttaaagtttcgtttacttccgcta
tccggtctaggaatggatggttcttcagtgccagaagcttttgacgggaaggtgcataca
gacgagctgattgaatgcgtacccgaaattttaccactgacggaaaaactcaaggaattt
tggaaagcttacggttccaaggaccttgtcgaagaaccttggttcgataaaggtgcagat
tctcgctcactgagctcctcaagcttgacaaaggagattcccgacacattgaaagcagta
ggcaggaaagaggtggagcttatattccttggcactggatcttctcagccttcgacatat
cgtaatgttagtgcgatctacgtccaccttttcgcaaatggggggatgcttctggattgt
ggagagggaacttacggtcagctactaagaaggtaccgcgtgtttcgtactgattccgtt
gtagctggcctacgtttgatttggatttcgcacatccatgctgatcatcacggtggtctt
agccgaatactctctgttcggcggcagcttctttccaagtctggcaacgtcgaaccgctt
ctcgtggtgggaccaaagttgctgaaacgggttctggaggcttatgatatggttgaggac
cttggggtggaattcttagattgtagtcaaacgacgttggaagcatcagacattgcggct
ggaggtcaacccaagggattcgttagctctatagtttctggatcacaggaaggcaggtcc
gggttcatgcagtgggttcagcggggataccatcttaggaatggactggatgaagctgga
aggagtaaactgcaggatacattgaaagcactgggtctgagcagcttagtgagcgtaccg
gtgatccattgcccacatgcatttggagtagttcttgaagctcaaaacaaggccgacact
tcaaaagcgggatggaagcttgcttattcaggggacacaaggccttgcaaggcctttatt
gaggcctctgacggcgctacagttttcattcatgaggccacctttgaggatggaatgtct
gaggaagcggtatcaaagatgcatagttcaactcacgaagccatacaggctggggctttg
gcgcgagcctatcggaccatcctgacgcacttcagtcagcgttactccaaggtgccagtt
tttgacgacagctacaacgacaggacatgcgtggctttcgacttgatgagcatcgattta
gttgatctgcccctgttaccgtcgctcatccccgtgctaaagcttctcttcaaggacgat
caagctgaagagcaagccgacgaagag
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integrated database retrieval system
