Selaginella moellendorffii: SELMODRAFT_407495
Help
Entry
SELMODRAFT_407495 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00040
Pentose and glucuronate interconversions
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SELMODRAFT_407495
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SELMODRAFT_407495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
9652303
NCBI-ProteinID:
XP_002966181
JGI:
407495
UniProt:
D8R5T1
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MDRPARVLLLVLACCCASLFFSLAAASRALKDHRHQGFNASASASGAIDNPRGNGTQRRE
AFSLLGCGSSGNPIDDCWRCDPNWHNNRKRLAECAIGFGRNAIGGKNGEIYVVTDSSDDD
PVNPKPGTLRYGVIQSEPLWIIFERDMSIRLSQELIVNSYKTIDGRGANVEIAHGPCITI
QYVSHVIVHGIAVHDCKPGGPAMVRSSTTHFGWRTVSDGDGISIFGSNNIWVDHCTLARC
TDGLIDAIMASTDITISNNHFSDHDKVMLLGHNDDYTADRAMQVTVAYNHFGQGLVERMP
RCRHGYFHVVNNDYTEWRMYAIGGSANPTINAEGNRFFAGFNENSKEITKREYTEQSIWK
SWNWRSEGNLFMNGAYFITSGAGSGSVYGKASSLAAKPAAYVGELTLSAGALLCGIGFPC
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcccggccagagtcttgcttcttgttcttgcgtgctgctgcgcatcgctcttc
ttctcgctcgccgccgcctcgagagcgctcaaggatcatcgacaccagggattcaacgct
agcgccagcgccagcggagccatcgataatcccagagggaatggcacacaaaggagggaa
gcgttctcgctactgggctgtggcagcagcggcaatccgatcgacgactgctggcgctgc
gacccaaactggcacaacaaccgcaagcgcctggccgaatgcgcgattggattcggccgc
aacgcgattgggggtaagaacggggagatctacgtcgtcaccgactcgagcgacgacgac
ccagtgaaccccaagcccggcacgctgcgctacggcgtcatccagtcggagccgctgtgg
atcatcttcgagcgcgacatgagcatccggctgagccaggagttgatcgtcaacagctac
aagacgatcgatgggcgaggcgccaacgtggagattgctcacggcccctgcatcacgatc
cagtacgtgtcccacgtcatcgtccacggcatcgcggtccacgattgcaagcctggggga
ccggcgatggtgaggagcagcacgactcacttcggatggaggacggtgtcggacggggac
gggatttccatctttggatccaacaacatctgggtggatcactgcacgctcgcacgctgc
actgatggtctcatcgacgccatcatggcttccacggacattaccatttcaaacaaccat
ttcagcgaccacgacaaggtgatgctcctgggacacaacgacgattacactgcggaccgg
gcaatgcaagtgactgtagcttacaatcactttggacagggtttagtcgaaagaatgccg
agatgccgacacggatacttccacgtcgtcaacaacgattacaccgagtggaggatgtac
gccattggaggcagcgcgaaccccacgattaacgccgaaggcaatagattctttgcggga
ttcaacgaaaactcgaaagagataacaaagcgagagtacacggagcaatccatatggaag
agctggaactggagatccgaggggaacttgttcatgaatggagcgtacttcatcacgtct
ggagctggatccgggtcggtctacggcaaggcctcgagcctcgccgccaagcccgcggcc
tacgttggtgagctaactctctcggcaggagcacttctctgcggcataggatttccatgc
tga
DBGET
integrated database retrieval system