Selaginella moellendorffii: SELMODRAFT_407609
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Entry
SELMODRAFT_407609 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_407609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_407609
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SELMODRAFT_407609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_III
MutS_V
MutS_II
MutS_IV
WDR55
Csm6_6H
Motif
Other DBs
NCBI-GeneID:
9652816
NCBI-ProteinID:
XP_002966582
JGI:
407609
UniProt:
D8R658
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MPPVQEPMYTRSIFTSLQSLANARLSGECGCTQKETDCKWSKQLQYLRNYWFKLGYINSI
LLYKLAKTTIGDFIRRHNAILIAILRSIILSSICVSSDPEIRWTISMRQGKQILTVIRST
AVPTNSIDLYVAPETVISPMICVPQGAYKYFKYREPALAKNPKTPAVSNPWPANMTDQTH
LAQTAVTFMSKSNVANTLVVGICLHQIRVRATESLPQNIHISISALVRSKDVVIGDDHNL
LGIPNLRAHSTVSTEFLLENPNGPRPANICHCVSHLRENSGRNRETVAGTLEFLDDDQYT
NLESALLALGCRECVLPAEHAKSVDGRRLRDVLARCNVRLTEKKKAEFKSRDIEQDLSRL
IKSTSVGELRELVVKYEVASAALAALLAYTDIFADDSNHGKYRLQQYSLDRYMRLDAAAL
RALHVLESKNDPNKNSTLFGLMNRTSTAGMGKRLLNRWLKQPLLDVDETKHRHDVVHMFV
EDAELRESLKNCLKRVPDVERLTRKLERSRATLQDLVKLYQVSVRLSVVKDALERYEGEF
ASAIEERAIDLDQIKNGEYIISASYDSSLKTIKADRDAVEEEIREAHEQATNDLDLPADK
SLKLDKTTQWGHVFRSTKEEEPKVRKKLAIGVNIMMAQVGCFLPCDRAEISIRSCIFARV
GRRLPELFATLFATHFHELTSISHRQGPSAHGPSKGPPVGISNFHVSAHIDPNSRKLTML
YKVEDGPCDQSFGIHVAEFLDFQNALSAELEDFSPQAILEDKGDAGSKRKRSSSSSSSRD
KGWKFLKGFAAWPLDQMRHKHALKKGQKVKVPTFRVPATQKVWVDLYAMPLPEADGKTCA
QIFEEAGCDSPTSPSCAACLGGPKETYA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccgtgcaggagccaatgtacactcggtcgatcttcacatctttgcagtccctg
gctaatgctcgtttatccggagaatgcggctgcacacaaaaagagactgactgcaagtgg
tcaaaacaattacagtaccttcgcaactattggttcaagcttggatacatcaattctata
ctcctgtataaacttgcaaagacaactataggtgacttcatccgcaggcataacgccatt
ttaatcgccatattgcgcagcatcattctgtcctccatctgcgtgagttccgatcccgaa
atcaggtggacaatctcgatgaggcaagggaaacaaatactgaccgtcatacgttctaca
gctgtcccaacaaactccattgatttgtatgttgcaccggaaacagtgatctctccaatg
atctgtgtgcctcaaggcgcatataagtacttcaagtacagggagccagctctcgctaaa
aatccaaaaacccctgcagtatcaaatccttggccagcaaatatgacggatcagactcac
ctcgcccagacggcagtgaccttcatgagcaaaagcaacgtagcaaacacccttgtagtc
gggatttgcctgcatcaaatccgggttagagcgacagaatcactcccgcaaaatatccac
atttcgattagcgcgctcgtccgcagtaaagatgtagtgatcggggatgatcacaatctt
ctcgggatcccaaacctgagggcacattccaccgttagcaccgaattccttcttgaaaat
cccaatggtcccaggcccgcaaacatttgtcattgcgtgtctcacctgagagaaaattca
ggacgaaatcgagaaactgtggctggtacactagagtttctagacgacgatcagtacacg
aacttggagtcggctctgctcgctctgggatgccgggagtgcgttcttcctgcggaacat
gccaagagcgtcgacggtcggagactccgagacgtgctggctcgatgcaacgtgcgactg
actgagaagaagaaggcggagtttaagtcccgagacatcgagcaagatctaagccggctt
atcaagagtacatcggttggggagctccgagaactcgttgtcaagtatgaagttgcgtca
gcggcattagcagctctacttgcgtacacggatatcttcgcagacgacagtaatcacggg
aagtataggcttcagcagtacagcctcgacagatacatgcggctggacgcggccgcattg
cgagcgctgcatgtactcgagtccaagaatgatccgaacaagaactcgaccctctttgga
ctgatgaatcgcacgtccactgctgggatgggcaagaggctactgaacaggtggctgaag
cagcctctacttgacgttgatgagaccaagcacaggcatgacgtcgtccacatgttcgta
gaagacgccgagctgcgggaaagtttaaagaactgcctcaaacgtgtgccggatgttgag
cgcctgacacggaagctcgagaggtcgagagctacgttgcaagacctcgtgaagctttat
caggtaagtgttcgtctctccgtcgtcaaagatgctcttgaacgttatgaaggcgagttt
gcgtccgccatcgaggaacgcgccatcgacctggatcaaatcaagaatggcgagtacatc
atttcggcatcatatgacagcagcttaaaaaccatcaaagctgaccgtgatgccgtggag
gaagagatccgtgaagctcatgaacaagccaccaacgatttggatcttcctgctgataag
tcgctgaagctggacaaaacgacgcagtgggggcacgtattcaggagcacgaaggaggag
gagcctaaagttcgcaagaaacttgcgattggtgtgaatatcatgatggctcaagtcggc
tgctttctgccctgcgatcgtgctgagatcagcatacgaagttgtatcttcgcccgggtt
ggcaggagactgccagagctatttgcaactctatttgcaacacacttccacgagctcacg
tccatttctcatcgtcaaggtccatcagctcacggtcccagcaaaggtcctcctgtagga
atctccaactttcacgtgagcgcgcacatagatcccaattcccgaaagctcacaatgctt
tacaaggttgaagatggcccttgcgaccaaagcttcggcatacacgtggcggaattcctc
gatttccagaatgcgttgtctgccgagctcgaagacttctcgccacaggcgattctggag
gacaaaggcgacgctggaagcaagcgaaagagaagcagcagtagcagcagcagcagggac
aaaggctggaaattcctcaagggctttgctgcgtggccgctggatcagatgagacacaag
cacgccttgaagaagggccaaaaagtcaaggttccaaccttccgcgtgccggcaacacaa
aaggtgtgggtggacttgtacgcaatgccactccccgaggcagacggaaaaacgtgtgca
cagatcttcgaggaggctggatgcgacagtcccacttctccctcgtgtgccgcatgcttg
gggggtcccaaagagacctatgcttga
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