Selaginella moellendorffii: SELMODRAFT_407792
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Entry
SELMODRAFT_407792 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_407792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_407792
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_407792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap
Nrap_D2
Nrap_D4
Nrap_D6
CCDC138_C
Motif
Other DBs
NCBI-GeneID:
9634049
NCBI-ProteinID:
XP_002966333
JGI:
407792
UniProt:
D8R6R8
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MDSALAQLKLEALLAEIRVDYGDLEPAVDAAIGAVKDALMKIPEEKVPRSLASGFLDDLG
VPEDKSLLEFKRPESFTLVGSYSTRTMARPATVVDLAMRIPKACFYEKDYLNHRYHAKRA
LYLAYVFKILSKCGLFKSIEWAFLHHDARKPVLVLHTASGMFDLRVIPTISSNVFDISKL
DDGRSNVHNEGTGEPLQATPSYNGSILEDMFVEELSTVEKNLLCHSGRLQEAVMLLKVWL
RQRSSYAQPDTMNGFLLSIMILHLSSVAGGQRLSNHMTALQNFRVSLEMIAKYDVLGKGF
RLELQGTERRPALMVDESRVLFPDTYGTNLLFRMTKNSLKELKLFAERTLEAMTADSGFQ
ESFLAAVEFASYFDCQIRLEIDDTSKCDFSNDGAWRGSEGKAENVLSKALKDRTKLVRVL
RRTIASGWNPKKGLSKFLPSKIQIGAILNDIENAYRMVDVGPSADKKEESAKFRSFWGKK
AELRRFKDGTIAEAVGWECEPWKRHLIIARVSEYILIRHFAGAGPVETVSDQLDFSLLDK
NQDSIGSTPKILQALEEFTKRLKALALPLKISSVQPISAAFRHAAVYTPRPRHSTKGGVV
GVFLEPLEVMIQLWSTDMAAISNISIKDDLIFHSVHSSTLNGLQGRCPAYGPTVRLAKRW
IGAHLFSDVITEEAIELLVAYIFTRPQPMFPPSTRITGFLRFLRLLANYDWHLSPLIVDI
NGDMSSKDRETVVAFFEATRRGEHADFYEGSKEGPAMFIATSYDMQSVTSTRCSPLKPAL
KRLVAYAKSSAALLTSNITGMDNRWQSLFRTPLNCYDTVLVLQRKSLPHPGRVLFSPELG
KLQAAFVCPDVRSHLAFRTNQLFVGFNPVVEFVQDIKAKFGDYYDVWYDVLGSDVIGLTL
QKQEVFVGTKRKRNDENSIAENLVSLGKGLVASIYLKVKEK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggattcggcgctggcgcagctcaagctcgaggcgctcctcgccgagatccgtgtcgat
tacggcgatcttgagccggcagtggatgcggcgatcggagcggtcaaggatgctctgatg
aaaatcccggaggaaaaggttccaaggtcgctcgccagtggattcttggatgaccttggt
gttcctgaggacaagtctttgctcgagtttaagagacccgaatctttcactttagtcggt
agctactcaacacgaacaatggcaaggcctgctacagtcgtggatttggcgatgcgtatt
ccaaaggcttgtttctacgagaaggactaccttaaccatcgttaccatgctaagcgcgct
ctttacttggcatacgttttcaagatcctttccaaatgtgggctttttaagagcatcgag
tgggcatttcttcaccatgatgcccgtaagccagtgttggttcttcacacagcctcagga
atgtttgaccttcgtgtgatacctacgatctctagcaacgtttttgatatctcgaaactt
gacgacggaagaagtaatgtgcataatgaagggactggagagccgcttcaggctacacca
agctataacggtagcatccttgaggacatgtttgtagaagaactcagcactgtggaaaag
aacttgttatgccattctggaaggttgcaagaggctgtgatgcttttgaaggtatggtta
cggcaaaggagctcttatgctcagccggatactatgaatggattcctcctatcgatcatg
attctccatttgagtagtgtagccggtggtcagcggctgtctaatcacatgacggccttg
caaaattttcgcgtttctttagagatgatcgcgaagtatgatgtgttgggaaaaggcttc
agactagaacttcaggggactgaaaggagaccagctctgatggttgacgagtctcgagtt
ctatttcctgatacatatggaacgaatcttttgtttcggatgacaaagaactcattgaaa
gagcttaagctttttgcggagcgtaccctcgaggccatgaccgctgacagtggctttcaa
gagtcctttcttgcggcagttgagtttgcatcttactttgattgccaaatcaggctggaa
atcgacgacacgtcgaaatgtgatttctctaatgatggggcgtggagaggaagtgaagga
aaggctgagaacgtcctaagtaaagctttgaaagatagaacaaaactagtgcgagttctc
aggagaactattgcgagcggctggaatccaaagaagggtctgtcgaagttcctgccctcg
aaaatccagattggagctatactgaacgacatagagaacgcctacagaatggttgatgtg
gggccaagcgcagacaaaaaagaagagtcagcaaaatttcgatccttttggggtaaaaag
gccgagcttcgtaggttcaaggacggaacaattgcagaagcagttgggtgggagtgtgaa
ccatggaagcgtcatcttatcatagctcgagtttcggaatacatccttatcaggcacttt
gctggcgcaggaccggttgaaacagtttctgaccaactagatttttctttactagacaaa
aatcaagattctatcggaagcacacctaagattttacaagcgctggaagagtttacaaag
cgcctcaaagcgcttgctcttcctttaaaaatttcctctgtacaacctattagcgctgct
ttcaggcatgctgcagtgtacacacctcggcctaggcattctaccaagggaggtgttgta
ggcgtgtttttagaacctttggaagtaatgatacagttatggtccacagacatggcggct
atcagtaatatcagtatcaaggatgatcttatatttcatagcgttcattccagcacatta
aatggcttgcagggaaggtgtcccgcttatggtcctactgtcaggcttgcaaagagatgg
attggtgcccatcttttctccgacgtcattacagaggaggctattgagttgctggtcgct
tacattttcactcgaccacagccaatgtttccaccttcaacgagaattactggctttctg
agatttcttagattgctcgcaaactatgactggcacctttctcctttaattgtggacatc
aacggagatatgtcttcgaaagatcgggagactgtagtggcttttttcgaggctactaga
agaggtgaacacgccgacttctacgagggttcaaaagaaggacctgctatgtttattgcc
acatcgtatgacatgcagtcggtcacttctacaaggtgttcgcctttaaagccagctctg
aaaaggcttgttgcgtatgccaaaagctctgcggcactgctaacgagcaatataactgga
atggacaacagatggcagtcattgtttcgaactccactgaattgttacgataccgtcctt
gtcttgcaacggaaaagcttaccccacccaggccgtgtgcttttctctcctgagttgggg
aagctccaagctgcgttcgtctgtccggatgttagaagccatctcgcgttccgcacaaac
cagctatttgtcggtttcaatccagtcgtggagtttgtgcaagatatcaaggcaaaattt
ggtgactactatgacgtgtggtacgacgttttgggaagcgacgtcatcggactcaccttg
caaaaacaggaggtgtttgttggaactaaaagaaaacgtaacgacgagaactctatcgcg
gagaacctcgtgagtttaggcaagggtcttgtggcgagcatatacttgaaagtgaaggaa
aagtaa
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