Selaginella moellendorffii: SELMODRAFT_408664
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Entry
SELMODRAFT_408664 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
smo
Selaginella moellendorffii
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
PB1
AAA_30
zf_CCCH_4
zf-CCCH_4
zf-CCCH
TPR_19
SLFN-g3_helicase
zf-CCCH_2
Torus
zf-CCCH_9
UvrD-helicase
Fis1_TPR_C
DEAD
nSTAND3
ResIII
AAA_16
AAA_5
AAA
Motif
Other DBs
NCBI-GeneID:
9632631
NCBI-ProteinID:
XP_002967556
JGI:
408664
UniProt:
D8R9J3
LinkDB
All DBs
Position
Unknown
AA seq
1778 aa
AA seq
DB search
MASEGRGSDRHAAAALQETMEEPCSRAFRLKLCHNESIRLVMVTLQLSMQALVEAIKKTF
SELKSASGIVISYGDSEGETITVETDEDLNLALGDMSASQAVPRFSVREKAMATGLAPAK
PSSQAGPCKFFQSGYCRNGSRCKFSHSSNNSSTGSTSIVRPVLLSAWSIERWLENLIGRS
PADNIEELSSPPGLEMLCKVASSLQLTRKAADMLAKLLTRDEMRSSMLRHETNKIYGSLA
DSRYAMQLQAHMTNQMPRTDEGLKPYLLLIEELQLRTSDGWKYLPLDAAEKLIAELPETP
LRDELGERLGGPVFRKIPIIPSKDELLSVIPTAVPVNKVGLRYTSVLEYLETHFRLLRED
FINPLRQGIKQYINRQGGYFAEVRIYSNVELKGVRFTLNGIENKVSFVAEKVRNKTREIN
WEQSKRLMFGSLLCMSRDNFQTITWATVAGRKELAQNMVDLRLLDGSDLDASFKYVMVES
AAAYFEAYSHVLKSLQREDMENIPFKSHLISLVKHVKEPAYLPQRAEGDRYDFSSAFPGG
TKEFGQFKFHILQDWPEWNSTLDSSQVAALKHALTKNLALIQGPPGTGKTFVGMLIVKLL
LANLKREATKTRHFSTAEDVPDLCGPVLIVCYTNHALDQFLEGIFRSEKNVIRIGGRSKN
KQLDGRNLQNLLQLARENRDVQGAYVRKAVAARDDRRRLEAEIRRCVDELNLPYVTETLL
HGVATEDQITNLFYLGRTSALAGKKVVEAWLEAENLRYVDVPARRVEQVANRYAVLDDEV
EAADLHDQTVNVPREEGRRTQGLAAPGDGGWVHVQTRRRNRPVEAVEQQQDPVVNNAHRD
EVPLELLVDYPDVWSLPLRERKRLHEYWLDEIHANAQKELTRFKQEYEAACIECKAADSE
IQLSLLRRAKVIGMTTTAAARLHDILVALKPEIVVVEEAAEVLESHILACISPYTKHLIL
IGDHLQLRPSVATFRLAQRHKLDVSMFERLVQSGVEHTMLKTQRRMKPCIAKLISSIYPQ
LRNHPSVLEYEDVKGVKSSLFFLDHNAPEEAGHEAGSKVNLAEAKLVVELCSYLLKQEAY
APGDMTILTMYKGQVQEISRRLKDRFQCRRVTGRPLGPEAENSEATDSWMPRVSSVDDFQ
GEENDIILLSLVRSNLVPGKEDEGTIGFLKTGNRVCVALSRARKGLYIFGNAQLLALKSP
LWKGILHGLHQDGLMGSKLVLCCQNHPGVETSVQHAEDFLQVGDGGCSRPCEYQLECGHA
CPRRCHPESHDTFICPKMCLKPYDGCTHRCVKSCHGREDPACPPCKEPVLKTFPTCGHEQ
SVPCSTDPAKLTCRSPCKKLLSCGHACPEPCGLPCAKLCRQVVRKELPCGHATKMMCPQD
PWTFSCLEPCRDILPDCEHRCGGTCDAPPSVEHHASSASSLVPGTAGTSAARFSAARSAR
DHAVTGHARSGSSAVIPASACVESLAQLTLEESESSDRFVELLDCGHIFEVTGLDQWMDM
DDSAETCSKAIVLKFCPACKTPVRKSFRYANVVKKKLHQIELVKMKVYGHEQTRAGMGML
SRKEYRQAFQIFTEVIKNQPGNFEAHLGMAQALRGLKEFGYAVTHLRFIAERSSLAADIR
SLPVPRLKRPYTPVPSSLNLSFVAVPSRSLTIQALIQWGSALTSLTEFSDAVRLCEIVLK
HDSTNGSGKRLKEMAEKRLTHQVVEAVSAEFSARGHWYQCPNGHVYVVGECGGPMQTSHC
PDCGSIIGGEHHQSAAGNTHSTIDGSDHALYSDHTEPY
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgaagggagaggaagtgatcgacatgcggcagctgctctgcaagaaaccatg
gaagaaccttgcagtcgtgcttttcgtttgaagctgtgtcacaacgaaagcatcagatta
gtgatggttacgttgcagctaagcatgcaggctctggtggaagccatcaagaaaactttc
agcgagctgaagagcgcgagcggcatcgtcatcagctacggcgactcggaaggagaaaca
atcacagtcgagacggacgaggacctgaatctagcactcggggacatgtctgcgagccag
gccgtgccaaggttttcggtgcgagagaaagcaatggcgacgggtcttgctcctgcaaag
ccttccagtcaggcaggaccatgcaagtttttccagagtggctactgccgaaatggatca
agatgcaagttttcacactcgagcaacaacagcagcacgggaagtaccagcatcgtgaga
ccggtgctgctgtctgcgtggtcgattgagaggtggctcgagaatctgataggaagatcc
ccggcagacaacatcgaggagctgagctcgccaccgggactagagatgctatgcaaggta
gcttcaagcttgcagctcacgcgcaaggcggctgatatgctcgcgaagctgctgaccagg
gatgaaatgcggtctagcatgctcaggcacgagacaaacaagatatatggatcactggcc
gactcgaggtatgcgatgcagctccaagctcacatgaccaatcagatgccacgcacggac
gaaggtttaaagccatacctgttgctgattgaagagctgcagctgcgaacttccgatgga
tggaagtatctccccctagacgccgccgagaagctgatcgcagagcttccggaaacgccc
ttgagggacgagctaggcgaaaggttggggggaccggtgttccgcaagataccgataatt
cccagcaaggacgagctcctcagcgtcatcccaaccgcagttccggtcaataaagttggg
cttcgttacacctcagttctggagtacttagagacgcacttccggctgctgcgagaggac
ttcatcaatccactcaggcaagggataaagcagtacataaacaggcagggaggatacttt
gcggaggtgaggatatatagcaatgtggagctgaaaggagtacgtttcacactaaacggg
atagaaaacaaggtgtcgttcgttgcagagaaagtcaggaacaaaacgagggagataaac
tgggagcagagcaaacggttgatgtttggctccttgctgtgcatgtcaagggataacttt
cagaccattacctgggcaacggtggcaggaaggaaagagttggctcagaatatggtggac
cttcgtcttttagatggaagtgatctcgacgcatcattcaaatacgtcatggtcgagtct
gcagcagcatacttcgaagcttattctcacgttttgaaaagcttgcaacgagaggacatg
gaaaacatacctttcaagtcgcatttgatatcgttagtgaagcatgtgaaggagccagcg
tacttgccacagagagcagagggcgatagatacgacttcagctctgctttccctggaggc
acgaaagaattcggtcagttcaagtttcatatactgcaagattggcctgagtggaactca
accctggactcgagccaggtcgcagcattgaagcacgctttgacgaaaaacctcgcactg
attcaaggaccacccggcactggaaagacgttcgtcgggatgcttatcgtgaagttgctg
cttgcaaatctaaagagggaggctacaaagacaagacactttagcactgcagaagatgtt
cccgacctctgtggacctgttttgattgtctgctacacgaaccatgcactggaccagttc
ctggaaggaatttttcgttctgagaaaaatgtgatcaggataggaggtcgaagcaaaaac
aagcagctagatggccgcaatctgcagaatcttttacagctagcaagggagaaccgggat
gtgcagggagcttacgtgagaaaggcagtggctgctagagacgaccggaggcgactagag
gcagaaatacgccggtgtgtggatgagctgaatcttccctatgtgacagaaactcttctt
cacggtgtagcgacagaagatcagataacaaatttattctacctgggacgcacgagcgca
ttagcaggaaagaaggtggtagaagcctggctggaagctgaaaatctcagatacgttgat
gttccagctcgaagagttgagcaagtagctaacaggtatgccgttctggatgatgaagtc
gaagcagcggacctgcatgaccaaacggtaaatgttccccgcgaagaagggagacgtacc
caaggcttggctgctccaggggatggtggttgggtacacgtccagactcggcgtcggaat
cgtccggttgaagcagttgagcagcagcaggatccagttgtgaacaatgcacaccgtgac
gaggttccacttgagctcctggtagattatcctgacgtttggagccttcctctgagggaa
cgaaagaggctgcacgagtattggcttgatgagatacatgccaacgctcagaaagaactt
accaggttcaaacaggagtatgaggccgcttgcattgagtgcaaggcagcagatagtgag
atccagttgagtttgctgaggagggcgaaagtcatcggaatgaccacgaccgccgctgct
cgtttgcatgacattctcgtagcgctcaaacctgagattgtggtcgtggaagaagcagca
gaggtactggagagccacatccttgcttgcataagcccgtataccaaacatctgatcctc
atcggcgaccacttgcagctgcggccatcggtcgccaccttcaggctggctcagaggcat
aagttggacgtttccatgtttgagaggctggtacagagcggagtcgagcacaccatgctg
aagacgcagaggaggatgaagccttgcattgcgaagctgatctcgtccatctatccacag
ctgaggaaccacccttctgtactcgagtatgaggacgtgaagggagtcaagtcgagtttg
ttcttccttgatcacaatgcacctgaagaagccggtcacgaagctggaagtaaagtcaat
cttgcggaggccaagcttgttgtggagctctgcagctatctcctcaaacaagaagcatac
gccccaggagatatgacgatactgaccatgtacaagggacaggtccaggagataagcagg
aggctgaaagaccgctttcagtgtcgccgggtaacgggaagaccgcttggacctgaagcc
gaaaactcagaagccacggatagttggatgccgagagtgtccagtgtggatgattttcag
ggagaagaaaacgatatcattctgttgtcgctggtccggagcaacctggtacctggtaag
gaagacgaaggcaccattggtttcctcaaaactggcaaccgcgtctgcgtggcgctctcc
agagctcgcaagggactgtatatctttgggaatgcacagctgctggcgctcaaaagtcct
ctctggaaaggcatacttcacggtctccaccaagacggacttatgggctccaagctcgtc
ctctgctgccagaaccatccaggtgtggaaacgagcgtgcagcatgccgaggattttctc
caggttggcgatggtggctgcagcagaccctgtgaatatcagctggagtgtggccatgcc
tgcccgagaaggtgtcacccggaatctcacgacacttttatatgtccgaagatgtgcctc
aagccatatgacggatgcacccatcgttgcgtgaagtcttgccacgggagggaagacccg
gcctgtccgccatgcaaagaaccggtgctgaagacgtttccaacctgcggacacgaacaa
tcagtgccgtgttcgactgatcctgcgaaacttacttgccggagtccatgcaagaagtta
ctctcatgcggccatgcctgtccggagccttgcggattgccgtgtgcaaagttgtgcagg
caagttgtccgcaaagaactgccctgcggccatgcgacgaagatgatgtgtcctcaagat
ccatggacgttttcctgccttgagccgtgcagagatatccttccagactgcgaacacaga
tgtggaggaacatgtgatgcgccgccatctgtggagcaccatgcaagcagtgcctcgagc
cttgttcctggaactgccggcacttcagctgcacgcttctctgctgcgagatctgccaga
gaccacgctgtgacaggccatgcacgaagcggctcgtctgcggtcatccctgcatcggcc
tgtgtggagagccttgcccaactgacgttggaggaaagcgagagttccgacagattcgtc
gagcttctggactgcgggcacatcttcgaagtaactggactggatcaatggatggatatg
gatgacagtgcggaaacttgctccaaagcaatcgtccttaagttctgccccgcatgcaag
acgcctgttcggaagtctttccgctatgcgaacgtagtgaagaaaaaactgcatcagata
gagctcgtcaagatgaaagtttatggacatgagcagacaagagcaggaatgggcatgcta
agcaggaaagaatacaggcaggcattccaaattttcacggaagtcatcaaaaaccagccc
gggaacttcgaagcacaccttggaatggctcaagctctacgcggcttgaaagaattcggg
tacgcagttactcacctccgatttatagccgagagaagcagccttgccgccgatatccga
agtttgccagtaccacgactcaagaggccatacactccggtccccagcagcttaaacttg
agctttgtggcagttccaagccgatctctcacgatccaagcgctcatccagtggggatcg
gcactgacaagcctgacagaattctccgacgctgtgagactctgtgagatcgttctcaag
cacgacagcaccaacggtagcggcaaacgcttgaaagaaatggcggagaaacgactaact
caccaggtagtggaagccgtgagcgccgagttctcagccagggggcactggtaccagtgt
ccaaacggtcatgtctatgttgtgggagaatgcggcggcccaatgcagacatcgcactgc
cctgactgtggatcgatcatcggcggcgagcatcatcaatcagctgctgggaacacgcac
tcgacgatcgatgggagcgaccacgcgctctacagcgatcataccgagccctactag
DBGET
integrated database retrieval system