Selaginella moellendorffii: SELMODRAFT_408722
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Entry
SELMODRAFT_408722 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_408722
03460 Fanconi anemia pathway
SELMODRAFT_408722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_408722
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
SELMODRAFT_408722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
9630882
NCBI-ProteinID:
XP_002967852
JGI:
408722
UniProt:
D8R9R6
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MDMALPPRIRKLEESVVNRIAAGEVIQRPASALKELLENSLDAGATVVSVIVKDGGLKLI
QITDNGHGIRYEDLPILCERHTTSKITAFEDLQKVSTLGFRGEALASMTFVAHLTVTTMT
EGQTHGYRASYKDGVMEGDPRPCAAVKGTQIMVENLFYNVTARRKSFKNPSDEYARVVDV
ISKYSIQNPKVGFSCKKFGDARADVQTPGNTSSLEAIRAVYGPGTSRELIEIKTSKNDSS
DFFEMNGYISSANYSAKRTTMILFINDRLVDCAPLKRAIEVVYAAVLPKASKPYIYMSIR
LPPEHVDVNVHPTKKEVSFLNQESLIEAIQTAVEQELLQSNKSRTFYAQTSLEAAFLPQG
QPASQAENKSSQKAPVNKLVRTDSQSPAGRMHAFLASGAELKNDLAAMRRIVRQRRHSND
TSGSSSGSSAVERMLAAVDTETHSGLLEIVRHSTFIGMADDVLALIQHKTRLYLMNCLTL
SKELMYQQALVRLRRLNALRLTNPAPVYDLIVMALDEEEQCGNYHATDGSKDGIAQVYCN
QILKRAEFLRECFSIDIDDNGNVCTLPLIVEQHTPDMDRLPLFALHLSKSVDCDVEDECF
ETVARALSEFYALHPPLLPRPSTNPPAVCAESNETEMDEDVGLEAESKWSQRDWTIQHVL
FPAMKLLLKPPVRMATDGTALQFKTSVVVVFPNENW
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcattgccgccaagaatccgcaagctcgaggagagcgtcgtcaacaggatc
gcggcgggcgaggtgatccagcgccctgcttccgctctcaaggagctcctggagaatagc
ctggacgccggcgccacagtcgtctcggtcatcgtcaaggatgggggattgaagctcatc
cagatcacggacaatgggcatgggatccggtatgaagaccttcctatactctgcgagaga
cacaccacctccaaaatcactgcctttgaggatttgcaaaaggttagcacactgggcttc
cgaggggaggctctggcgagtatgactttcgtagctcatctcactgttactacaatgact
gaaggccaaactcatggatacagagcctcgtataaggacggagtgatggaaggcgatcct
cggccttgcgctgctgtgaaaggaacccaaataatggtggaaaatctgttctacaatgtc
acagctagaagaaagtctttcaagaacccaagtgacgagtatgctcgcgttgttgacgtg
atcagcaaatactcgatccaaaatccgaaagtcggattttcgtgtaagaagtttggtgat
gcacgagcagacgtgcaaactcctggcaacacgtcgtcgttggaagcaattcgagcagtc
tatggacctgggacctctcgagaacttatcgaaatcaaaacctccaagaacgattcctcg
gacttttttgagatgaacggttacatttcgagtgcaaactacagtgccaagagaacaacc
atgattctgtttataaacgatcgtttggtggactgtgctccgctgaagagggcaatcgaa
gttgtgtatgcggctgttctaccaaaggcatcaaaaccgtacatttacatgtctattcgc
cttcctccggagcatgttgatgtcaatgttcatccaacaaagaaagaggtgagcttttta
aatcaagagtcgcttatagaagcaatccaaacagcagtcgaacaagaacttttgcagtct
aacaagtctcggacgttttatgctcagacttcgcttgaagcggcatttctgccacaagga
cagcctgcgagtcaagcagagaataaaagctctcaaaaggcacctgttaataagcttgtg
agaacggactcgcaaagccccgccggacgaatgcatgctttccttgccagtggagcggag
cttaaaaatgatttagctgccatgcggcgaattgtaaggcaacgacggcactccaacgat
acttctggctcatcttctggttcgtctgcagtcgaacgtatgcttgccgctgtcgataca
gagacacattcaggcctgctcgaaatcgtaaggcactctacgtttattggaatggcggac
gatgtcttggcgttgatccaacataagacgaggctttatcttatgaactgcttgactcta
agcaaagagttgatgtaccaacaggcactcgtccggcttagacgtctaaatgcactccgg
ctcaccaatcctgcgccagtgtatgacttaatagtcatggctttggacgaggaggaacag
tgtgggaactatcatgctactgatggatctaaggatggaatagctcaggtttactgtaac
cagattttaaagcgtgctgagtttttgcgagagtgtttctcgattgacattgacgataat
ggaaacgtttgcacacttcccttgatcgtggagcagcatacgccggacatggacaggctc
cctcttttcgctctgcatctttcgaaaagcgtcgattgtgatgtagaggacgagtgcttt
gaaacggtagcaagggcgctttcggagttttacgctcttcatcctcccttgttaccgaga
ccttcaaccaatcctccggctgtttgcgcagaaagtaatgaaaccgaaatggacgaagat
gtcggtttggaggcagaaagcaaatggtcccagagagactggacgattcagcatgtactc
tttccagccatgaagctgttgctaaaaccaccggtaaggatggcgactgacggtactgca
ctccagtttaaaacgagtgtagttgtcgtttttccaaacgaaaactggtaa
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