Selaginella moellendorffii: SELMODRAFT_409223
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Entry
SELMODRAFT_409223 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14003
prolactin regulatory element-binding protein
Organism
smo
Selaginella moellendorffii
Pathway
smo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SELMODRAFT_409223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_409223
Membrane trafficking [BR:
smo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
SELMODRAFT_409223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
RMC1_N
Beta-prop_WDR19_1st
KNTC1_N
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
DUF7165
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_RIG_1st
Beta-prop_LRRK2
Kelch_1
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
9650080
NCBI-ProteinID:
XP_002968423
JGI:
409223
UniProt:
D8RAS2
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MASTSNKARKFGTPLFCAAWASADSTDASVAHGISYAICGGGGGDSSSGLRNTLVLARYD
ADSRELSEPLDTLFTDDDTACAMAMHPNRKEFICSFPATERHNGKLRLLRLTGGKNLRLE
NVERELKPLQDLGEQRTVKFSADGKLFAVGGQDGHLKVLKWPSLEVVLDRSDAHRSIKDL
DFSLDGSFLAATDDVGPSRIWDLKTASPAAALPLNKAGFCCFSRDGARPCLYVTSAEDFK
GYITTWNTKWKKVGSRKLANEPISALTISPDGKLLAIGSSEGEVFILSASKLSVLQRIKR
AHMVFVTALDFSPDNRALLSVSGDSSARVTPCQTPQGWRTVVILWIILIALLLALILSRR
GSLEFFPSASTHSSEHDMI
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacgagcaacaaggcgaggaaatttggtacgccgctcttctgcgcggcctgg
gcgagcgccgacagcacagatgcatccgtcgcgcatgggatctcgtatgcgatctgcggc
ggcggaggtggagattcgtcctctggcttgcgcaacactctggttctcgctcgatacgat
gccgattccagagagctcagtgagccgctcgatacgctcttcacggacgatgatacggcc
tgcgccatggctatgcatcccaatcgaaaggagtttatctgctcgtttccagcgaccgag
aggcataatggaaagttgaggcttctgaggctgactggtggaaagaacttgcgattagaa
aatgtcgagcgggagctgaagccattgcaagatctaggcgagcagcgaaccgtgaagttt
agtgccgatgggaaattgtttgcggtggggggtcaggatggacacttaaaagttctcaag
tggccgtctctggaagttgttctcgatagatctgatgcgcaccgatcgatcaaggacttg
gatttcagcttggatggctcgtttttagcagctaccgatgacgttggtccgtcccgcatc
tgggatttgaaaacggcatctcctgctgctgcgcttcctctaaacaaagctggattctgc
tgcttctccagagacggagcgaggccttgcctttacgttacttcagctgaagatttcaaa
ggctacataacaacctggaatacgaagtggaaaaaagttggatcgaggaaactagcgaat
gaacccatatcagctctgacgatcagtcccgacgggaagctcttggcaattggaagctcc
gaaggtgaggtgtttatcctgagcgcgagcaagctgagcgttctacagcggatcaagcgt
gcacatatggtcttcgtcacggcattggatttctctcccgataacagggctttactctcg
gtttctggagactcgagtgctcgcgtaacaccttgtcaaacaccacaaggctggaggact
gttgtgattctgtggatcattctcatcgcgttgctcttggctttgattctcagccggcga
ggctctctcgagtttttcccaagcgcttcaacgcattcgtccgagcacgatatgatatag
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integrated database retrieval system