KEGG   Selaginella moellendorffii: SELMODRAFT_409247
Entry
SELMODRAFT_409247 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
smo  Selaginella moellendorffii
Pathway
smo04120  Ubiquitin mediated proteolysis
smo04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    SELMODRAFT_409247
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    SELMODRAFT_409247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smo04121]
    SELMODRAFT_409247
Enzymes [BR:smo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     SELMODRAFT_409247
Ubiquitin system [BR:smo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    SELMODRAFT_409247
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SELMODRAFT_409247
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 9631265
NCBI-ProteinID: XP_002968121
JGI: 409247
UniProt: D8RAU8
LinkDB
Position
Unknown
AA seq 499 aa
MVVGGHPTARETFSRVRNFAVTGGMIFWKKWRRRWNSCSVEVSNGAIGQRGGGGGTLLCI
PSDTLADDKRLKKRSRRLLVSDSTGESHNNAKRSAAMYSTAFNFKLSGTTKTYPGTSTTN
SSLDRSVDSSGMPEPEPCDQSKHETWEFETLVPFSCETPSLLSSDVISTIDYDETGQLIA
TGGLARKIRICSYQELVNGMGRECFQGRNVKNLFTTICMPAKLSSLKWRPGSSEVIACGD
YDGSVTEWDVEHGVTVSERYEHTGRTVWSIDYCRDFRGLLASASSDSTVRFWSRNVERSV
GIIKSLKRNSMCCVEFGRSSGPCCYVAVACADASVYLYDMRSLGSPVANLRGHERSVSYV
RWLGENSLVSSSPDGTIRLWDIASTLTGTGESWHARNDELPIARTFGCHSNTRNFVGLSV
ASSGGGSGGLIASGSENNEVFVYSSSVSERPVFRHKFNDAVVLDDKAFVGSVCWTKQEDH
LSLISANSEGIVQEWLFHT
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggtggttggcggtcatccaacggccagggagacgttctccagagttcgaaattttgcg
gtgactggcggaatgatcttctggaagaaatggaggcggcgctggaattcctgctcggtt
gaggtgtccaatggagcaatcgggcagagaggaggcggtggaggaacgctgctttgcatt
cccagcgacacgctcgcagatgataaacggctgaagaaacgttcgcgcaggctgctcgtc
tcggatagcactggcgagtcccacaacaatgcgaagcgatcggcagcaatgtactccaca
gctttcaacttcaagctctcggggaccacgaaaacttatcccgggaccagcactaccaac
agctctttggaccggtcagtggattcatcgggaatgccggagccggagccgtgtgatcag
tccaagcacgaaacgtgggagtttgagacgctggtcccgtttagctgcgaaacgccatcg
ctgctgtcgtcggacgtgatctccacgatcgactacgatgaaaccggacagctgatagct
actggtgggctggcaaggaagatcaggatttgctcgtaccaggagctagtgaacgggatg
ggaagggagtgtttccagggacgcaacgtgaaaaacctcttcaccaccatttgcatgccg
gcaaagctaagcagtctcaagtggaggccggggagctccgaggtgatcgcttgcggtgac
tacgatggctcggtcacggagtgggacgtagagcacggggtcacggtgagtgaaagatac
gagcacacgggacgaacagtgtggagcatcgactactgcagagacttccggggcctgcta
gcgtcggcgtcgagcgacagcaccgtgaggttttggagcaggaatgtggagcggagcgtt
gggatcatcaagtcccttaagcggaactcgatgtgctgcgtggagttcggccgctcctcc
ggtccctgctgctacgttgccgtggcctgcgccgacgcgagtgtgtatctgtatgatatg
cggagcctggggagcccagtcgcgaacctgcggggccacgagaggtccgtgagctacgtg
agatggctgggcgagaacagcttggtgtcctcgtctccagacggcacgattcgactgtgg
gatatcgcctcgacactaactggtaccggcgagagttggcacgctcggaacgacgagctg
ccgatcgcgagaacctttggctgtcactccaacaccaggaactttgttggactgtctgtt
gcgagctccggcggcggctccggcgggctcatcgcgtccgggtccgagaacaacgaagtc
tttgtgtacagctcttccgtctcggagagacccgtcttccggcacaagttcaacgatgcg
gtcgtgctggatgataaggccttcgtggggtcggtttgctggaccaagcaagaagatcac
ttgtccttgatctcggcaaactccgagggcattgtgcaggagtggctatttcatacgtag

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