Entry |
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Name |
(RefSeq) hypothetical protein
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KO |
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Organism |
smo Selaginella moellendorffii
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:smo00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_410159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:smo03019]
SELMODRAFT_410159
Messenger RNA biogenesis [BR:smo03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
SELMODRAFT_410159
mRNA cycle factors
Common to processing body (P body) and stress granule
SELMODRAFT_410159
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
800 aa
MTTVLGDADGAGGERIHSQVIELEKQLRAKSKEKKDVRSLRTKFREKSVAIILGDPEFAE
KRDIGASLWHLVFYNVIEEFRGRIRAAASAAAGGKAVNLRKLLGDFREFIADATKFYCGL
VLKIKKKYGLAQEGLEGGDSDALGVDSKRLTYFRRSCYRIFIHLGDLARYKEQNPDSENY
SPDWKLPASYYFKAVKLWPATGHPHNQLAVLATYSHNDFLAVYHYFRSLAVDDPFVTARD
NLVLLFERNRQQYSELLEKKRSLDVHKKKPAKEHAKDAEKKHSGDDETELLRTFFIRFVR
LNGILFTRTSLETFSEVYQESVRDLEKLLALDVSTLEGLFSPELRKNSDVPGLALVVLQL
VTVLIYSVPSGSSRSSYADVLQHSTMSRHALAAAFKIVGCFMSSCTKFKDIGESPFMPAC
LVFLEWLAYKQEWAIGRTVEDDKQYGAQGFFWKEALALLNTVCEAESWDGVADEASPTAL
WEDHELRGFTPLLSAQLRLEYDNKQPEEAAALRLRRLLSAGKSIAELVDASDTGAGLAFD
KDMVRFFLAGNHMDRRSREKVVLSKVPEQAAKQEPKQEPSGQMLVTEPPASASSVPVNED
EDDEVIVFKPAVKVSPPVLTERNDGMVQAGTVTPQVRDDLVPPLVRGDQLVPQIPEDFPA
PPIPDDFAAPPQARDDFAATAQLRDDFAALGREEQARDDFAAQPPQARDDFMARQEFVSQ
QAREELAALVRDDFAARAKLNSVRPPPGFGPIPQRAVSNAEEHSVSFSRHGNANAPADRA
AAAAATGDSNAAFPATATFV |
NT seq |
2403 nt +upstreamnt +downstreamnt
atgacgaccgtcttaggtgatgccgacggcgccggaggagaacgcatccatagccaggtt
atcgagctagagaagcagctgagagccaagagcaaggaaaagaaggatgtgcgcagcttg
aggaccaaattccgcgagaagagcgtggcgatcatattgggagaccccgagtttgccgag
aagcgtgacatcggggcgtcgctatggcacctcgtcttctacaacgtgatagaggagttt
cggggcaggattcgcgctgccgcctccgccgccgccgggggaaaggcagtgaacctccgc
aaactcttgggtgactttcgcgagttcatcgccgacgccacgaagttctactgtggcctc
gtcttgaagatcaagaaaaagtatggcttggcacaggaaggccttgaaggtggcgactcc
gacgctctgggggtagatagtaagaggctgacttacttccggaggtcttgctataggatc
tttatacatctgggtgatctcgctcgctacaaggagcagaatcccgacagtgagaactac
tcgccggattggaagctaccagctagttattatttcaaggctgtgaagctatggccggct
actgggcatcctcataaccagctcgctgttttagcaacttactcgcacaatgacttcctt
gccgtgtatcactactttaggagccttgcagtcgatgaccccttcgttacggcgagagat
aacctggttcttctttttgaaaggaatcgtcagcagtatagtgagctattagagaagaaa
cgctctttggatgtccataaaaaaaagcccgcgaaggagcacgcgaaagacgctgagaaa
aagcattccggtgacgacgaaaccgaactattgcgaaccttctttatccgtttcgtgcgg
ctgaatggaatacttttcaccagaacaagccttgaaacgttctctgaagtctatcaagaa
agcgttcgcgacttggagaaattactggctctggacgtttcaactctggaaggactattt
tcacccgagctacggaaaaactcagacgttcctgggttggcgctcgtggtacttcaactt
gtcacagtcctcatatattccgtcccgagtgggagttctcgcagcagctacgcagacgtt
cttcagcactcgactatgtccaggcacgcactcgcggcagctttcaagattgtcgggtgc
ttcatgtcatcttgcacgaagttcaaggatataggcgaaagtccttttatgccagcatgc
ctggttttcttagaatggctggcctacaagcaggagtgggcgattggtagaacggtagaa
gatgacaaacagtacggtgcacagggttttttctggaaggaagccttggctctgctcaac
acggtctgtgaggctgaaagttgggatggggttgcagatgaagctagtccgactgcctta
tgggaagaccatgagctgaggggcttcactccattactttcggcacagctcagactagag
tatgacaataagcagcctgaagaagcggcggctttgcgactgcgaaggcttttgtctgcg
gggaagtctattgcagagctagtggatgctagtgatactggtgcaggcctcgccttcgac
aaagacatggttagatttttcttagcagggaaccacatggacaggaggtctagagaaaag
gtggtgctctcgaaagtgcctgagcaggcagctaaacaggagcctaaacaggagccttcc
ggacaaatgctagttactgaaccacccgcatcagcttccagcgttcctgtcaatgaagac
gaagacgacgaagttatagttttcaagcctgcggtcaaggtttcccctccagttctcacc
gagaggaatgatggtatggtccaggcagggacggttacgccgcaggtccgggacgatttg
gtgccgccgttggttcgaggcgatcaactggtgcctcaaatcccggaagactttcccgcg
cctccaatccctgacgacttcgctgcgccaccacaagctcgggatgatttcgccgccacc
gcccagctacgggacgactttgcggcgctcggtcgagaggaacaagctcgtgacgacttc
gctgcgcagcccccgcaagctcgagacgactttatggcacggcaggagttcgtgtcacaa
caagctcgggaggagcttgcggcgctcgtccgagacgacttcgcggcgcgagcaaagctg
aacagcgtgcggcctccgccgggcttcgggccaataccgcagagggccgtctcaaatgcc
gaagagcacagcgtatccttttcccggcatgggaatgcgaacgctccagcagatcgagca
gcagcagcagcagcaacaggcgattccaatgccgcctttccagccaccgcaacctttgta
taa |