Selaginella moellendorffii: SELMODRAFT_410515
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Entry
SELMODRAFT_410515 CDS
T01496
Symbol
PGP19A-1
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_410515 (PGP19A-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_410515 (PGP19A-1)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_410515 (PGP19A-1)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_410515 (PGP19A-1)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_410515 (PGP19A-1)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_410515 (PGP19A-1)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_410515 (PGP19A-1)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_410515 (PGP19A-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_29
AAA_16
AAA
Zeta_toxin
nSTAND1
SbcC_Walker_B
AAA_23
EMC3_TMCO1
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
9645732
NCBI-ProteinID:
XP_002969903
JGI:
410515
UniProt:
D8REZ9
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MALGSLGAIAHGLALPIFFFSFGRLAHVLGSDKDLRHMYHSVSKVALDFLYLGLILFGAS
WLGRGILFLKQWEEFLALDHVAEVACWIQTGERQCRKIRISYLEAILRHDISFFDRDDAR
TGELVSSISSNTLLIQQAISEKMGVLIHHVSTFFGGIALGFATVWQLGLLTLATVPVVIL
AGGLYAHVITGVSSKTQKEYDKAGNIVEGAISQIRTVYSFVGEQKTISLYTAALGSTLRL
GYRAGLVKGIGMGAMYALPLCSWALLMWYGGILVRNRTTNGGKALSTIFCVLLGAFALGQ
TAPTIAAISKARAAAFKILETLDDKNTISNSEESTEFCLQHVRGELELNKVTFNYPSRPD
ARILHDLSLKIPPGKSIGIVGPSGSGKSTIISLIERFYDPTSGEILLDGYNTKSLQLKWL
RLQIGLVNQEPALFATTIAQNILYGKDDANMEEIKLAARTSNAHDFINQLPQGYETQVGS
RGLQLSGGQKQRIAIARALVRNPAILLLDEATSALDAESENVVQDALDKIMVARTTVIIA
HRLCTVKGTDSIAVLQNGRLVETGSHQQLIADEKSVYSGLVRLEEARTTEATSRLSNCSS
SSFRRLSSVDDLNSSTGGSFRLSKLNGLSFTSREDEENVEADDVLKKFVTINLPDLPFLV
LGTIGAVCSGLPNPAYSFLVSKILDVYYYQDFEEMKRHTAKYSVVFVMVAVGAFVALFVQ
YYSFGIAGENLTMRVRKMMLSGILRNEISWFDREEHSSSQLASRLASDAVYMKSASGDIL
GSMVQNVAVIVASFAIAFLVEWRVAIVVAATFPFIVLSTFAQKLFLQGLAGDLERSHSRA
SMLAGDAVSNIRTIAAFNAEKKLVNLVTLELQTPAKRSLFHGSIVGLGYGFSTLSLFGSY
GLGLWYGAVLVKASKSSPANVLQAFLVLVMAAFPIADSLAMLPDISKTAKSFKSVFELLD
RATEIDLDGPRSRKLIKLRGDIELRDIHFAYPSRPEVAIFAGLNLKIRAGRSLALVGPSG
SGKSSVIALVERFYDPFKGMVLVDGRDVKKLNVKAYRRHVGLVQQEPALFGTSICENIAY
GKESASEAEIVAAAKAANAHEFISSLPDGYATNVGERGVQLSGGQKQRVAIARAVLKNPA
ILLLDEATSALDAESERTVQEALERLMEERTTVVVAHRLSTICSADQIAVLHDGEIVEQG
RHSELVAKRGAYAQLIKLQSSS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgggatcgctcggcgccatcgcgcacggcctggcgctgccgattttcttcttc
tccttcggacgattggctcatgttcttggatcggacaaggatcttcggcacatgtatcac
agcgtgtccaaggtggcattggatttcttgtatctgggattgatcctctttggcgcgtct
tggctaggtagagggattttgttcttgaaacaatgggaggaattcctagctctggatcat
gttgcagaggttgcgtgctggatccagaccggagagcggcaatgcaggaagatcaggatc
agctacttggaggcaatcctgcgacacgatatctcgttcttcgatcgcgacgacgcgagg
actggggagctcgttagcagcatttcctccaacactttgctcatccagcaggctataagc
gagaaaatgggagtcctcatccatcacgtttccacgttttttggaggcatcgcattggga
tttgcaactgtgtggcagctcggacttttgacgctggcaaccgtaccggtggtcattcta
gctggaggtctctacgctcatgtcatcactggcgtttcatcgaagacccagaaggaatac
gacaaagcgggaaacatcgttgaaggagcaatttctcaaattcggacagtctattcgttt
gttggcgagcaaaagacgatcagtctgtacaccgctgcgctcggttctacgctacgtctg
ggatatagagccggacttgtcaaagggattggaatgggagcaatgtatgcattgcccttg
tgttcctgggccttactgatgtggtacggtggcattctcgtaagaaaccgcacgacaaac
ggtggaaaagctctatctacaatattttgcgtgctcttaggtgcctttgctctcggacag
actgctccgaccattgctgctatatcgaaagcaagagccgctgcgttcaaaattctggaa
actttagacgacaagaatacgatcagtaacagtgaagagtcaaccgaattttgtcttcaa
cacgtccgtggagagcttgagctgaataaagttaccttcaactatccctccaggccagat
gctcgaattcttcacgacctgagcctcaagataccgcctggaaaatcgataggcattgtt
ggccccagtggctccgggaagagcacgataatatctctcattgaaaggttttacgaccca
acttcaggagaaattctcttggatggttacaacaccaaatctctacaattaaaatggctc
cggttacagattggtctcgttaaccaagaaccagctttgttcgctaccaccatcgcgcaa
aacatactttatggcaaagatgatgcgaacatggaggagataaagctggctgccaggact
tcaaatgcgcacgattttataaatcagcttcctcaaggctacgaaacacaggttggttca
agaggcttacaactttctggaggccaaaagcagaggatagccatagctagagcattggtc
agaaatccagcgatactgttgttggatgaggcaactagtgctttagatgctgagtccgag
aatgtggtacaagacgcactcgacaaaatcatggtggcaagaacgacagttattatagca
cacaggttgtgtactgtcaaaggcaccgattccattgctgtgcttcaaaatggaaggctt
gtggaaaccggatcgcaccaacagcttattgccgacgaaaaatctgtatattcgggactt
gttcggcttgaggaagccagaacaacggaagctacctcaaggctttctaattgctcctcg
agcagctttcgtaggttgtcgagtgtggatgatctaaattccagcaccggtggcagcttc
agattgtcaaaactgaacggtctaagttttacctcaagggaagacgaggaaaatgtcgag
gccgatgatgttctgaagaagttcgtgacaatcaacttaccagatttgccgttcttggtt
cttggtacgattggagctgtgtgttcgggccttcctaatccggcatactcattcctcgtc
tccaaaattctcgacgtctactactatcaggacttcgaagaaatgaaacggcacacagca
aagtacagcgtggtcttcgtcatggttgctgtgggggcatttgttgccctttttgtacag
tactactcatttgggattgctggggaaaacttgacgatgcgcgtaagaaaaatgatgcta
tcgggtattttacgcaatgagataagctggtttgatcgagaagagcattcaagcagccag
cttgcctctcgtttggcttctgatgccgtgtacatgaaatctgcaagtggagatatacta
ggttcaatggttcaaaacgtcgctgtgatagttgcttcgttcgccatagcttttttggtg
gagtggcgagtagcaattgtcgtggccgcaacttttccgtttattgtattgtcgaccttt
gcgcagaaattgttccttcaaggattggctggagatctggaaagatctcattctcgggca
agcatgctggccggagatgctgtgagcaatattcgaactatagcagcattcaacgcagaa
aagaaactcgtcaacttagttactttggagcttcagaccccggctaaacgcagcttgttt
catggaagcattgtgggactcggctatggattctcgactctgtctctgttcgggtcctat
ggtctcggcctttggtacggtgccgtcctcgtcaaagcaagcaaatcaagccccgcaaac
gttctgcaagcttttctcgtcctcgtcatggcggcatttcccatcgcagacagtctagca
atgcttccggacatttccaagacggcaaagtcattcaaatcagtgtttgagctgctggac
agagcaacggaaatagatttggacggtccaaggtcacgaaagctcattaaactccggggt
gatatagaactccgagacattcactttgcatatccgtcgagacccgaggtagctatcttt
gctggcctgaacttgaagattcgagctggacggagtttggctttggtcggtcccagcggc
tccgggaagagctcggttattgcattggtggaaaggttctatgatcctttcaaggggatg
gttcttgtggacggcagagatgtcaaaaagctcaacgtcaaggcgtacaggcgtcatgtt
ggtctagtgcaacaagaaccagctctttttggaacgagcatttgcgagaacatcgcctac
ggaaaagagagtgcttcggaagccgagattgtggctgctgcaaaggcagccaacgcccac
gagtttattagcagccttcccgatggatacgctacaaacgttggtgagcgaggtgtccaa
ctttcaggtggtcagaagcagcgggtagcaattgcacgagccgttctcaaaaatcctgca
atactattgctggacgaagccacgagtgctctagacgccgagtctgagagaactgtccag
gaagctcttgagcggctgatggaggagagaacgacagtggttgtggcgcacaggctatct
acgatttgcagtgccgaccagattgccgtgctgcatgacggtgagattgtggagcaggga
aggcactcggagctcgtagccaagcgaggagcctacgctcagctcatcaagctccagtca
tcgtcataa
DBGET
integrated database retrieval system
