Selaginella moellendorffii: SELMODRAFT_410613
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Entry
SELMODRAFT_410613 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_410613
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SELMODRAFT_410613
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SELMODRAFT_410613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_30
DEXQc_Suv3
T2SSE
IstB_IS21
AAA_19
TIP49
DUF4600
Motif
Other DBs
NCBI-GeneID:
9645339
NCBI-ProteinID:
XP_002969712
JGI:
410613
UniProt:
D8RFA6
LinkDB
All DBs
Position
Unknown
AA seq
1812 aa
AA seq
DB search
MTQARRLTAALRSPGDENGRIFDVDKAYLDRMRILERLRQHYPSPAKEGEADGVEFGSDL
DFRAPCKEEKRVETRFTKPREDPPAIVNLRWVQDICKESGDELAFAVCRVLESSDSGDQI
AGYLFDLMGDNGFEHIQVLLQCRKELVEAFHKGLSRLKLENPSQSNQGRVPSYGTQVSVQ
TSLDRQIDKLRRKEEKRHGKRGEESELDWTGGFSAVVDASERPDEGIEGLVGKGDGFTGM
TGASLPPGSVKKVFKGYEEVRVPPTPTSSLKPGEFLVKISELDDISQAAFQGYQTLNRIQ
SRIFPTAYNSNENILVCAPTGAGKTNIAMITVLHEIRKHFKFGVLQKSEFKIVYIAPMKA
LAAEVTAAFGRRLAPLNVVVKELTGDMQLTKRELEETQMIVTTPEKWDVITRKTSDMALA
TLVKLLIIDEVHLLNDDRGAVIEALVARTLRQVAKFLRVSPETGLFYFDASYRPVPLMQN
YVGVTEPNFALRNSIMNEVCYGKILEAVRNDQQAMVFVHSRKDTVKTARILVDIAQRNGE
IGLFLNMDHPQYGIMKREASNSKSKELWELFQSGFGVHHAGMLRSQRNLAERFFSEGLLK
ILVCTATLAWGVNLPAHTVIIKGTQLYDPKAGGWRELGILDVMQIFGRAGRPQFDSSGEG
IIITTHDKLAHYLRLMTHQLPIESQFVSALKDNLNAEVVLGTVTNVREASTWLSYTYLFV
RMTASPLAYGLEWNEAMNDPQLVAKRNALIVDAARALNKAKMLRFDEKSGNFYVTDLGRV
ASHFYLQYRSVETYNEMLKQHMSDSELFKLVSHSSEFENIMVREEEQQEIAKLLHTSCPL
EAYGGAESKYGKINVLIQVYISQGYLDGFSLIVDSAYISASLGRIMRALFEICLRRGWCS
MSAMILEYCKAVDHRIWPHQHPLRQFHGVLSPEVLRKLEDRGADLDKLYDMNEKEIGSLI
SSPYGGKLVRQCMDHFPFINLSANVSPITRTVLQVTLTITADFTWKDRFHGTALRWWIWV
EDSDNEHIYHSEHWTLTKKMVAEGSQTISFTIPIFEPIPSQYYIRTISDTWLQASYLYTL
SFQHLILPELHPPHTELLNLRPLPVSALKNQKYEERYKFSHFNPIQTQAFHTLYQTDHNV
LLGAPTGSGKTISSELAMLRLFNTQPDMKVIYIAPLKALVRERVDDWKKSLVPTLGKKLV
ELTGDFTPDLLALLEADIIISTPEKWDGISRSWHNRSYVTKVGLMIIDEIHLLGADRGPI
LEVIVSRMRYISSQTARHVRFVGLSTALANAKDLGDWLGIENVGLYNFKPSVRPVPLEVH
IQGYPGKFYCPRMNSMNKPTYAAIRTHSPLKPVLIFVSSRRQTRLTAFDLIQFAAQDEQP
RQFLQMNEEDNSMILYKVVDSSLKHTLQFGIGLHHAGLCDSDRTLVEELFYNNKIQVLVC
TSTLAWGINLPAHLVVIKGTEYFDGKSKRYIDYPITDVLQMMGRAGRPQFDQHGKAVILV
HEPKKSFYKKFLYEPFPVESSLVHHLHNHLNAEIAAGTIATKQDALYYLTWTYLYRRLVM
NPSYYGLEDTAAESINHFLSSLVNGTLEALDDAGCIKVSEDNVEIQMPGLIASKYYLHYT
TVALFSSNVHSESSLEELLQLLSSATEYDELPVRHNEENLNAILAQQARMRVDNKLLDDP
HVKANLLFQAHFSRLELPISDYVTDTKSVLDQSIRILQAMVDAAANGGWLRTTIRTMQLL
QMIMQSKEEGWWIVVGSTSTWELFAMRRVSIKDKRLSTSVAVPRVPAGTQEIALFLVSDC
YVGLDQTHTIPV
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggcgcgccggctcaccgccgcattgcgatctcccggcgacgagaatgggcgg
atcttcgacgtggacaaggcctacctcgatcggatgaggattttggagcggttgcggcag
cactatccgtcgcctgccaaggaaggagaggcggatggcgttgagtttggaagcgatttg
gattttcgggcgccttgcaaggaggagaagcgagttgagacgagattcacgaagccaagg
gaagatcctccggccattgtaaatcttcgatgggtgcaagacatatgtaaagagtctggg
gacgagctagcctttgcagtgtgtcgcgttctggagtcatcggactctggagatcagatt
gccggctacttgtttgatcttatgggggataacggatttgagcacatccaagttttgctc
cagtgcaggaaagagctcgtggaagcgtttcacaagggtctgtctcgtttgaaattggaa
aatccttctcaatcaaaccaaggacgtgtaccgagctatggcactcaggttagcgtacag
actagtttagatcgccagatcgataaactgcgacgaaaagaggaaaagagacatggaaaa
cgtggcgaagaatcggagctcgactggactggtggattttctgccgtagttgatgctagc
gagaggcctgatgaagggatagaaggtctagttgggaaaggtgatggtttcactggcatg
accggggcatcccttccaccgggttctgtgaaaaaggttttcaaaggctacgaagaggtg
cgagtaccacccacaccaacatcgtcgttgaagcctggagaattcctggttaaaatttcc
gagcttgatgacatatcacaggcagctttccaagggtaccagaccctcaatcgcattcaa
agccggatctttccaacagcgtataacagcaacgaaaacatattggtctgtgcaccgaca
ggagccggaaaaactaacattgccatgatcacggttctacatgagataaggaaacacttt
aagtttggagttctacaaaaaagcgagttcaagatcgtctacattgctccaatgaaggca
cttgcagcggaagtaacagcagcatttggtcgaaggcttgcaccactgaatgttgttgtc
aaggagcttacaggtgacatgcagctcaccaagagagagcttgaagagacgcagatgatc
gtaaccacaccggagaagtgggatgtgatcacacgaaaaaccagtgatatggctctcgcg
actcttgtgaagttgcttattattgacgaggtgcatcttctaaacgatgatcgtggagcc
gtcattgaagcacttgttgcgagaacattgagacaggtggctaagtttttgagggtgagt
cccgaaaccgggttgttctactttgatgcaagttatcgtccagtgcctctgatgcaaaac
tacgtgggcgtcactgaaccaaactttgcgctacgcaatagtattatgaatgaagtgtgc
tacggaaagatattggaggcggttcgtaacgatcagcaagcaatggtctttgtgcattct
cggaaagataccgtgaaaactgctcgtatactggttgatatagcacaaagaaatggcgag
ataggccttttcttgaatatggatcatcctcagtatggaataatgaagagagaagcttcg
aactcaaagagcaaggagctttgggaactgttccagtccgggtttggagttcatcacgct
gggatgctacgctctcagagaaacttggcagaacgttttttttcagaagggctcttgaag
attttggtttgtactgcaacattggcctggggtgtaaatctaccagctcataccgtcatt
atcaagggtactcaactgtacgatccaaaagctggtggttggcgagaactcggcattctt
gatgtcatgcagatttttggacgcgcagggcgtccgcagtttgattcaagtggagaagga
attattattactacccatgacaagcttgcacattatttgcgattgatgacgcaccaatta
cccattgagagccaatttgtaagcgctttgaaagataacttgaacgcggaagtggttctt
ggaactgttactaacgttcgtgaagcgtcaacttggctcagctacacatatttgttcgtg
cgaatgacggccagcccgctagcttatggattggaatggaatgaggccatgaatgatcct
caacttgttgcgaaacgaaatgctctaattgtagatgctgctcgtgcgctgaataaggca
aaaatgttacgttttgatgaaaaaagtggcaacttctatgtcacggacttgggccgtgtt
gcaagccatttttatcttcaatacaggagtgtggaaacttacaacgagatgcttaagcag
catatgagtgatagcgagctttttaagctggtctcgcattcatctgaatttgaaaacatt
atggtgagggaagaagagcaacaagaaatagctaagcttctccatacctcttgccctttg
gaagcttatggtggggctgagagcaaatatggaaaaatcaacgttcttatacaagtctat
atatctcaaggttacttggatgggttttctcttattgttgatagtgcctacataagtgca
agcttgggacgcattatgagagcgttgtttgaaatttgcttgcggcgtggctggtgttca
atgtcggcaatgattctagaatattgcaaggctgtagaccaccgtatttggcctcatcag
catcctttgcgacaatttcacggagtcctttcccccgaggtgctgcgtaaactggaagac
cgcggtgctgacttggataaactttatgacatgaatgaaaaagagattggctctttgatc
agcagtccctatgggggaaagctggtacgtcaatgtatggatcacttcccgttcatcaat
ctgtctgcaaacgtgagtccaattacgcggactgttcttcaggtcaccttaactattacc
gcggattttacttggaaggacaggtttcatgggacggctttaagatggtggatttgggtg
gaggattcggataacgagcatatttaccactcggagcactggacattgaccaagaaaatg
gtggcggaaggaagccagacaatttcattcaccattcccatttttgagccaattccctcg
cagtattacattcgtaccatttcggacacgtggttacaagcgtcctacctatatacactc
tcttttcagcatcttatcttaccagagctccaccctccacacaccgagctactaaacctt
cgaccattgccggtgtcagccttgaaaaaccagaaatatgaagaacgatacaagttttca
catttcaatcctatccaaacgcaggcttttcacactttgtaccaaactgatcataatgtt
ctgctgggcgctccaactgggagtggaaaaacaatatcctcagagcttgccatgcttcgc
ctttttaacacacaaccagatatgaaggtcatatacattgctcctttaaaggctcttgta
cgggaaagagttgacgactggaagaaaagtctggtacccacgcttggaaagaagctggtg
gaattaacgggcgattttactccggatttacttgcgttgcttgaagcagatatcatcatt
tcaactcctgaaaaatgggacggtattagtcgtagttggcacaacagaagctacgttaca
aaggtcggcctgatgatcattgacgaaatacatttgctaggcgcagacagaggtccgatc
cttgaggttatagtatcccggatgcgctatatttcttctcaaaccgctcgtcatgttcga
tttgttggcctgtcaacggcccttgcgaatgcaaaggatttgggagactggctgggcatt
gaaaatgttggactgtataatttcaagccaagcgttcgcccagtaccactagaagttcat
atacagggatatcctgggaagttttactgccctcgaatgaatagcatgaacaaaccaact
tacgctgctatcagaacacactcgcctttgaagccggttttgatatttgtctcttctcgt
cgtcaaactcgacttactgccttcgatctcattcagttcgcagcccaagacgaacagcca
cgccagtttttgcaaatgaatgaagaggacaacagcatgattctgtacaaggttgtggat
agtagtctaaagcacacattgcagtttgggatcgggttgcaccatgctggtctctgtgac
agtgacagaactctagttgaggagctcttttacaacaacaaaattcaggttttagtttgc
acgagcactttagcttggggaatcaatctcccagcacatctagtcgtaatcaaggggacc
gagtattttgatggaaagtctaaacgctacattgattatcctatcacggatgtattgcaa
atgatgggccgggcaggacggccccagttcgatcaacacggaaaggctgtaatattggtt
catgaaccgaagaaaagcttctacaagaagtttttatatgaaccttttccagttgaaagc
agcttggttcaccaccttcataatcacttgaacgcagagatagctgctggaacaattgca
acaaagcaagatgctctttactatttgacatggacgtatctgtaccggcggctggttatg
aatccaagctactacggtttggaagacacagcagctgagtccatcaatcatttcttgtca
agtcttgtgaatggcacacttgaagcactggatgacgctgggtgcatcaaagtgagcgaa
gacaacgtagagatacagatgccgggactcattgcttcaaaatactatcttcactacaca
acagtagcacttttcagctcaaacgtacactctgagagttcattggaggagctattacag
ctgctttcatctgctacggagtatgacgagcttcctgtccggcataacgaggaaaacctg
aatgcgattcttgcgcagcaagcacgaatgcgtgtagacaataagctgctagatgaccct
catgtgaaggccaacttgctgtttcaggctcatttctcacgactggagctgccaatttct
gactacgtgacagacacgaagtcagtgctggaccaaagcatacgtatacttcaagcgatg
gtggatgctgcggccaatggaggatggctcagaacgaccattcgaactatgcaactcttg
cagatgattatgcagtccaaggaagagggatggtggatcgttgtaggaagcacaagtact
tgggagctcttcgccatgaggcgcgtgagcatcaaagacaagcgtctcagcacaagcgtt
gcagtgccaagagttcctgcgggaacacaggagatagcgctgttcctcgtctcagattgc
tacgttggcctcgatcaaactcataccatcccggtttag
DBGET
integrated database retrieval system
