Selaginella moellendorffii: SELMODRAFT_410679
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Entry
SELMODRAFT_410679 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_410679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_410679
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SELMODRAFT_410679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
9645373
NCBI-ProteinID:
XP_002970000
JGI:
410679
UniProt:
D8RFI0
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MAPHRRSSGGGSGGGGGAAAKQQRSIASFFSPGAPSPAAKKVLVINDATTAASNPAVTAP
NEEGDDEKSKESPLKRPADDNVCGSPPAESSKSLKRLKQKVVLEDGDDEEFLEKMDLENS
HCGKTRRSSSVSSASAAVKTSDGLGAPRKRLRKKYVVASSDDDSGCEVKGADVKEKRTME
DEATIGEIPKEDTRQRAEELEKITRFKEETVRQIEPATTRADECCEADRSLLLSGEALER
FGGRISRKFSFLGKNRKDSSGRRHDWPNFDSRTLFLPAEFVKGLTGGQRQWWEFKAKHMD
KVLLFKMGKFYEMFEMDAHVGAQDLDLQYMKGEQPHCGFPEKNYFENVEKLVRKGHRVLV
VEQTETPEQLEERKRKTGSKDKVVRREICAIITKGTMVDSGMISDNAEPSFLAAVTEKAD
NYGSSLVGLCVVDASRALFMLGQVEDDSARTKLRSILTELRPVELVLPLGLLTDATQKAL
REQTRKPLISQLVPSKEFWDAEQTTKEIRTSYGASDAMPTVLQKILELGVSSEPVLSAFG
GCICYLRQSLLDGQLLQLGRFELLPGSDLSFEHSAAIPEADPAEAHMVLDSAALDNLEIL
ENSSNCGVAGTLLCLLDHCITPFGRRLLKQWIVRPLCNIESIVQRQNAVVDMQGVAENAV
SEFRRELFGIPDLERLLARLSANSGENGRHSQKVVLYEDAAKKQIKELVAALRGFQKLVK
AVSCFGNCLPQLKSARLRSLLTFGKGFPDLKPLLQYFEDSFDWSESEANGRVTGGDHSNL
SASDPREKLESYLKSQQKFFKNPEISYVTVGKDTYLLEIPEELHTKVPSDYELRSSRKGF
CRYWTPRVKELLQELSLCENEKEAALRGILQTLTKRFCDDHDHWLSAIRAVSELDALMSI
SSARLHMDGMTCLPTFVPASQLAKPVFRAKALRHPIVAVSTAASTPFVPNDVVLGGGSNP
EVMLLTGPNMGGKSTLLRQVCLGMILAQIGSEVPAESLELSLTDRLFVRMGAKDQIMTGQ
STFLIELLETAVMLRCATQNSFVALDELGRGTATSDGQAIAHAVLHYLAHNVQCRGMFSS
HYHKLASDFANDPSVSLCHMACKVGGGNNELEAVTFLYKLTSGSCPKSYGVNVARIAGKR
KFPSHAHRACCAEPYYSLPNSRKKWNLTVTKRTSSKPSSMPLLTVRNNFARLGRRQNLYK
HEAGFATGFGRPSFEELRYGQGSIENRFLQGF
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcatcgaaggagcagcggcggcggtagcggtggaggaggcggcgccgcggcc
aagcagcagcgcagcattgcgtctttcttttctcccggtgctccatcgccggcggcaaag
aaggttttggtgatcaatgatgcgactaccgctgctagtaatccagcggtaacagcacca
aatgaggaaggagatgatgagaaaagcaaagagtctccgctaaagaggccggcggacgac
aatgtatgtggaagtcctccagcggagtctagtaaatcactcaaaagactgaagcagaag
gtcgttttggaagatggtgacgacgaggagttccttgagaagatggatttggagaacagt
cattgtggaaaaactcgaagaagttcttctgtttcttcagcaagtgcagcagtcaaaacg
tcggatggtttgggagctccgaggaaaaggctgagaaagaagtacgtggtggcttcttca
gacgatgatagtggctgtgaagtcaaaggtgccgatgtcaaagaaaaacgaacgatggag
gacgaagcgacgatcggagaaattccgaaagaagataccagacagcgagctgaagaactc
gaaaaaattacacggttcaaagaggaaactgttcggcagatagaacctgccacaacgaga
gcggatgagtgttgtgaggccgatcgctcactactgctgagtggtgaagcacttgaacgt
tttggcggtcgaatctcaagaaaattcagctttcttggcaagaaccgcaaggattcttca
ggaaggcgccatgactggccaaattttgattctcgaacactttttttgccggccgagttt
gtgaaagggctcacaggaggccagaggcaatggtgggaattcaaggccaaacacatggat
aaagttcttctttttaagatggggaagttctacgaaatgtttgagatggatgcacatgtt
ggagctcaagaccttgatctgcagtacatgaagggtgagcagccgcattgtggcttcccg
gaaaagaattattttgagaatgtagagaagctagttcgaaaggggcatcgagtgttggtg
gtggagcaaacggagacaccagaacagcttgaagaacgcaagagaaaaacgggcagcaaa
gacaaggttgtaagacgtgaaatatgtgcgatcataactaagggaaccatggtggactct
ggtatgattagtgacaatgcggagccctccttccttgctgcagtaacagagaaggcggac
aattatggaagttctttggtcggactttgtgtggtagatgcctccagggctttatttatg
ctcggtcaggtcgaggatgactccgcaaggacgaaacttagatctatattgacagaactg
aggcctgtcgaactagtcttgccgcttggcttgctgacggacgctactcaaaaggcctta
cgcgaacaaacaagaaaaccattgatcagtcaacttgtaccttcaaaagagttctgggac
gctgaacagacaaccaaagagattcgcaccagttatggagcttcagacgcgatgcccacc
gttcttcaaaaaattctcgagcttggtgtttcgtcagaaccagttttatctgcttttggg
ggctgcatttgttacttgaggcaatcgcttcttgatggtcagctcctccagcttgggagg
ttcgagttgcttccaggatcggacctgtcattcgaacattcagccgctattcctgaagct
gatcccgcagaagctcacatggtacttgacagtgctgctttggataacttggaaatattg
gaaaactcttccaattgtggagtggcagggactcttttgtgtttactcgaccactgcata
acaccattcggaagacgtctattgaagcagtggattgtcaggcctctttgcaatattgaa
tccattgtgcaacggcaaaatgccgtcgtagatatgcagggtgtggcggaaaatgcagtt
tcagaatttcgacgggagctctttggtattccggaccttgaaagacttctagctcgactc
agtgcaaacagtggggaaaatgggaggcattcacagaaggttgtgctgtatgaagatgct
gcaaagaagcagatcaaggaactcgttgcggcacttcggggctttcagaaacttgtcaaa
gctgtatcttgtttcggcaattgtctgccgcagctcaaatcagctcgcctgcggtcttta
ttgacctttgggaaaggatttcctgatttgaagcctcttctgcagtattttgaggattcc
tttgactggtcggagtcagaagcaaatggtcgagtaaccggtggtgatcatagcaactta
tcggcatctgatcccagagaaaaactcgagagctacctgaagagccagcaaaagtttttc
aaaaatccagagatttcttacgtgactgttgggaaggatacttacctgcttgagataccc
gaagagctgcatactaaagtgccttcagattacgaacttcgctcgtctagaaagggtttc
tgtcgatactggacaccaagagtgaaagagctgttgcaagagcttagcctttgtgaaaac
gagaaggaagctgctctgagaggcatactccagactcttactaagcgcttttgtgacgat
cacgatcactggctctctgctattcgagctgtttctgaattggatgctcttatgagcata
tcgtctgcccggttgcacatggatggaatgacgtgcttgccaacgtttgtcccagcaagt
caacttgcaaagccggtttttagagccaaagccttacgacatcctatagtggctgttagt
actgctgcaagcactccttttgttccgaacgatgttgttctcggtggcggaagcaatcca
gaggttatgcttttgacagggcccaatatgggtggcaagtcgactttgcttcgtcaagta
tgtctgggaatgatactcgcacagattggttcagaggttccagctgagtcgctcgagctt
tcccttacggatagattattcgttcgtatgggagccaaggatcaaatcatgacaggtcaa
agcacattcttgattgaactactggaaaccgctgttatgctgcgctgtgcaactcaaaac
tcgtttgtggctctggacgagcttggacgtggaacagcaacctcagacggccaagctata
gcgcacgccgtgctccattatctagcacacaacgtccaatgtcggggaatgttttcttct
cactaccacaaacttgcaagcgattttgcgaatgacccttccgtgtctttgtgccatatg
gcatgcaaggttggaggtggaaataacgagctggaagcagtaacattcctctacaaactc
acttctggctcttgcccgaagagttatggcgtcaacgtcgcacgaatagcaggcaagcga
aagttcccgtctcatgcacatagagcgtgttgcgcagagccgtactacagtctgccaaac
tcgagaaagaagtggaatctcactgtcacgaagcggacatcatcaaaaccatcctcgatg
cctctgttgacagtgcggaacaacttcgcacggcttgggagaaggcaaaacttatataag
catgaagccgggtttgcaacgggatttggacgcccaagctttgaggaattgcgctatggc
caggggagcatcgagaacaggtttttacaaggattttaa
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integrated database retrieval system
