Selaginella moellendorffii: SELMODRAFT_411494
Help
Entry
SELMODRAFT_411494 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_411494
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_411494
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
SELMODRAFT_411494
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
SELMODRAFT_411494
SLIK complex
SELMODRAFT_411494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
CHD1-like_C
HTH_CHD1_Hrp3
ResIII
HDA2-3
DEAD
Chromo
SWI2_SNF2
CHDCT2
Motif
Other DBs
NCBI-GeneID:
9632975
NCBI-ProteinID:
XP_002970703
JGI:
411494
UniProt:
D8RI44
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MMSEYEEADESNENEDSFVGQQEHFSSRPRKSRYEPSDGDDASQSDHGDPEYKEDSGDEN
YEDGGYENGAASYRYSTVESRDFQLEPEESEEYVMEEEEEDDNGGDDPQDADFDPVSPEN
NFSQQEEDDDDDYNASAEEQEEAASTGGFDVSSDEELVRPANPRKRPAIKIAQPRFGSNN
QKRHRIVQKKDYPSDEEDSSDGEDQRNHRKVVVASSIRPVVIAPSQRAPADFSSRETRSR
RSIPRKSYVEEESEEDEEDQKAKKKVSPDEIEEEDSDKIERVVWHQPKGIAEAEMLEGRK
AEPFILDTDPHADLDWEEQEFYIKWKGQSYLHCQWQGLADLHQLSGYKKVVNYMKKVEED
RQKRRNLSGEEAEVHDLSKEMELDLLKQYTQVFVTTIPVEKDIDLAFAQDFIDEYKERES
ASNFQGKSVDFQRKRGKLILRKLEEQPEWLKGGKLRDYQLEGLNFLVNGWRMNTNVILAD
EMGLGKTVQSLSMLGYLQYNLEILGPFLVVVPLSTIANWAKEFRKWLPNMNVLVYVGNVA
SREMCQKYEFFTASGRAKFNTLITTYELVLKDKDVLSQFKWDFLMVDEAHRLKNNEAALY
TELMKFSAKNKVLVTGTPLQNNVEELWALLHFLDPIKFRNKDDYKNLVSFNEAELARLHA
ELRPHLLRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFSDLNKGVRGNQVSL
LNIVVELKKCCNHPFLFESADHGYGANATMTDNSRVQRVVLSSGKLVLLDKLLVRLKETG
HRVLIFSQMVKMLDILADYLRLRGFQFQRLDGSTKHHLRQQAMEHFNAPGSEDFCFLLST
RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQEFVVNIYRFVTCRSVEEDILE
RAKKKMVLDHLVIQKLNAQGRLEMKETKKATTMFDKNELAAILKFGAEELFKEEKKSEEE
AKSKLENMDIDEILERAEKVSGDTEQPGGELLGAFKVANFSQGEDDAAFWSRLIPAETAK
EAPDLGPRAARKIRTYAEDLPADRYSKRRKNAEEVGRKRSTRLSRAPEPPPRVDGASAHV
YEWEGTTISKRDANAFVKGVKKFGDKSRIDMIVVNTGSAIENASEDSQLDLMDALLDGCT
EAVDNSHNPKAAILDFFGVTVKAQEVLTRVKELTLLGKRIRRYQDPVSQFRLRSHSKNPS
SMWSRWSQVDDARLLLGVYYHGYGNWEKIRTDERLLLGKKMAPGGATAGETSLPRATHLD
ARVNTLLRKETELDKGSNGETSKSRSKRNQESSSKLRQGKDRASNSSRPSGTRKSARNIN
RENAAIAAAAREEAEDKEEGEISDDDESTQRRPKGVTDEKERDQRWHNWCEGVMKGEVRT
LKRLQNLKSAHSESNEKVVVRVKKYLQKLGQKIDSILDDNKGEKCNPQKMAMRLWNYVAR
FSDLSGPDLSDLYHKLKRQPEAAAPSAASVENNNENNGTSREKHEPLTYKRRHGRKDNAE
SSKRRRKGGDEEETGARNSSADKAHYFYGKGDFSQGPS
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagagtatgaagaggccgacgaatccaatgagaatgaggatagttttgtagga
caacaagagcatttctccagtaggccgaggaaatctaggtacgagccttcagacggcgac
gacgcgagccaatctgatcatggagatccagagtacaaagaggattcgggtgatgagaat
tacgaagatggtggatacgagaatggagctgcttcgtataggtattctactgtagagtcc
cgggattttcagctcgagcccgaggagtctgaagaatatgtgatggaggaagaggaagaa
gacgataatggaggtgacgaccctcaagacgctgattttgatcctgtgtcaccagagaac
aatttctcgcaacaggaagaggacgatgacgacgactacaacgcaagtgctgaggagcag
gaagaagccgccagcactggaggttttgacgtatccagtgacgaggagctcgttcggcct
gcgaatcccagaaagcggcctgcgatcaagattgcgcaacctcgattcgggtcaaataac
cagaaacggcatagaattgtgcagaagaaagactatccgtcggatgaagaagactcttct
gacggtgaagaccagcgtaatcatcgtaaggttgttgttgcaagctccatcagacctgtt
gtcatcgccccaagtcaacgagcaccagcagacttttcctccagggaaacgagaagcaga
agatcgattcctaggaaatcttacgtggaggaggaaagcgaagaggatgaagaagatcaa
aaagcaaagaaaaaggtatccccggatgagattgaagaagaagacagtgacaaaatagaa
agggtagtgtggcaccagcccaagggtatcgcggaagcagaaatgttagaaggcaggaaa
gcagaaccgttcatcctcgatacagatcctcatgctgatttagattgggaagaacaagag
ttttacataaaatggaagggacaatcctaccttcattgtcaatggcaaggtcttgctgat
ctccaccagctaagtggatacaagaaggtcgttaactacatgaaaaaagttgaagaagat
cggcagaagagaagaaacttgagtggagaagaggccgaggtgcatgatttgagcaaggag
atggaattggatctcttgaagcagtatacccaggtgtttgttactactatccctgtggaa
aaggacattgatctcgcatttgctcaagattttatcgacgagtataaggagagagaaagt
gcatctaattttcagggaaaatctgtcgattttcaacggaagagaggcaaattgatctta
agaaagcttgaggagcagccagagtggttgaaaggtggaaaactacgtgattaccagcta
gaaggtttaaactttctagtaaatggttggcgtatgaatacaaatgttattcttgccgat
gaaatgggtctaggaaagaccgtacagtcgttatcgatgctgggatacctgcagtataac
ctggaaatcttaggaccttttttagtggtcgtacctctttccacaatcgctaactgggcc
aaagagtttcgaaaatggttgcccaacatgaatgtgctggtgtatgttggcaatgtggcc
agtcgtgagatgtgtcaaaaatacgagttcttcactgcatcgggacgagctaaattcaac
actttgatcacgacgtacgaacttgtattgaaggataaagacgtcctatctcagttcaag
tgggactttctgatggtggatgaagctcatcgtttgaaaaacaacgaggcagcgttgtat
actgagctcatgaaatttagtgcaaagaacaaagttcttgtgactggaacgcctttacaa
aataatgtcgaggagctctgggcgcttttacattttcttgatcctataaaatttagaaac
aaagacgattataaaaatctggtgtcatttaacgaagctgagctagcgaggctgcatgcc
gagttgcggccacatttgttgagaagggtgataaaggacgtggagaaatctttgcctcct
aaaatcgagcgtattcttagagtggagatgtctccacttcaaaaacagtattacaaatgg
attttggagcgtaatttcagtgatctgaacaaaggcgttcgtgggaatcaggtgtctctg
ctgaacatagttgtggaactaaagaagtgctgcaaccatccctttctttttgagagtgcg
gatcatggttacggagcaaatgcaactatgaccgacaatagtagagtgcaaagggttgtt
ctcagcagcggcaagctggttttactcgataagcttcttgtccgtttgaaggaaacgggc
cacagggttctgattttctctcagatggtgaaaatgctggatattttagcggactattta
cgtctgagaggctttcaatttcaaaggctggatggcagcacaaagcaccacttacgtcag
caggctatggaacacttcaatgcccctggaagtgaagatttttgtttcctactttcaaca
agagcggggggccttggaatcaatcttgctactgcagacactgtgattatctttgattct
gattggaatccacagaatgaccttcaagcaatgagtcgggctcatcgtattgggcaagag
tttgtcgtcaacatttatcgcttcgtgacatgtagaagtgtcgaggaagacattttggaa
cgcgcaaaaaagaaaatggttcttgatcatctagtcatacagaagctgaatgctcaagga
cggctggaaatgaaggagaccaagaaagctacaacgatgtttgacaagaacgagcttgca
gcaattcttaagtttggggcggaagagctcttcaaggaagaaaagaagagcgaagaggag
gccaagagcaagctggaaaacatggacattgatgaaatacttgagagagcagagaaagtg
agcggcgataccgagcaaccgggtggcgagcttcttggtgctttcaaggtagcaaatttc
agtcagggagaagatgatgcagcattctggagccgtctgatccccgctgagactgcaaag
gaagctccagatttgggacctcgtgcagcaagaaaaatacgaacctacgccgaagatctt
cccgctgataggtacagcaagagaagaaagaacgctgaagaagttggccgtaagcggtct
acaaggctgtcaagagccccggaacctcctccacgcgtggatggtgcttcagcccatgtt
tacgagtgggagggtactactatttcaaaaagggacgcgaacgcgtttgttaaaggcgtt
aaaaaatttggtgacaagagccggatagatatgattgttgttaacacgggatcagctatt
gaaaacgcgtctgaagattctcaactggatctcatggacgctcttttggatggttgcacc
gaagctgtggacaacagccataacccgaaggctgctattttggatttttttggagttaca
gttaaagctcaggaggttcttactcgagtcaaggagcttactttacttggaaaacgcatc
aggcgataccaagaccctgtttctcagtttcgtttgcgttcgcattccaaaaatccgtct
tcaatgtggtcgagatggtctcaagtcgacgacgccaggcttttacttggggtttactac
catggctatggaaattgggagaaaattcgaacggatgagaggcttttactaggtaagaag
atggctccaggcggtgcgacggcgggagaaacttctctaccaagagcaacccatctggat
gctcgggttaatacacttctacgaaaggagacggaacttgacaagggatccaatggcgag
acctcgaagagccggtcgaagcgtaatcaagaaagctccagtaaactgcgacagggcaag
gaccgggccagcaacagcagccggccttcggggacacgaaagtcggcaaggaatatcaac
agagagaacgctgccatagcggctgctgcgagagaggaagcagaagacaaggaagaaggg
gagatctcagatgatgatgaaagcacgcagcggcgaccaaagggtgtcaccgacgagaag
gaaagggaccaaagatggcataactggtgcgagggtgtcatgaaaggcgaggtgaggacg
ctcaaacgtctccagaatttgaagtccgctcactccgagtccaacgagaaggtggtagta
agagtgaagaagtacctacaaaagctcggtcagaagattgacagcatcttggacgacaac
aagggggagaaatgcaatcctcaaaaaatggccatgaggttgtggaactatgtcgcgagg
ttttcagacctctccggccccgatctctccgacttgtaccacaagctcaaacgtcagccg
gaagcagccgcgccctccgccgcgagcgtcgagaacaacaacgaaaacaacggtacgtcg
agggagaaacacgagcctcttacgtacaagaggcggcacgggcggaaggacaacgcagag
tcgtccaagaggcggaggaaaggaggggacgaggaggaaacaggtgctaggaacagctcg
gcggacaaggcacactacttctacggcaaaggggacttctcgcaaggaccatcttga
DBGET
integrated database retrieval system