Selaginella moellendorffii: SELMODRAFT_411829
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Entry
SELMODRAFT_411829 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03257
translation initiation factor 4A
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_411829
03012 Translation factors [BR:
smo03012
]
SELMODRAFT_411829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_411829
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SELMODRAFT_411829
mRNA cycle factors
Stress granule specific factors
SELMODRAFT_411829
Translation factors [BR:
smo03012
]
Eukaryotic type
Initiation factors
eIF-4
SELMODRAFT_411829
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SELMODRAFT_411829
Exosomal proteins of bladder cancer cells
SELMODRAFT_411829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
Motif
Other DBs
NCBI-GeneID:
9641803
NCBI-ProteinID:
XP_002971259
JGI:
411829
UniProt:
D8RJ60
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MEDPVCFHRQAAALELLVPSSIPFLLHSVLSRRQAPIQSQREPDAFSLEDFLFGYHGIIL
NCSVIPGNLSKHSIWDNICSIYRGIERCKEFKDAPPPVKSVRLLELLLRLVRPRSNVFDN
MLVVTAPANVKHFVEVLRCYYHPWKLVGSMEEHQWMLDRLDIVVASPQEARKLKASMTLL
ALVLVDDDNPEFFSRVMDLIESLLFFSLPVSLKPSPCRPAKLDVINYLAPWEAINMSKEL
LRAIELSLPEAACCSGFLDPCFCNAVQNFSVFRRNVVCQDWSGILAFMPGLIPDSTSTAS
IVLAPGHRIPQLLELLQAFVDGLGLFEVKVTYLSEPAIMNELSPGIVLGTPDRMQEALCG
ASTTWKPHRAVLVETNVLVSTQKVHVEAICSILWSRDVILGIHSLDPSPGVEDIVTRFCK
GETSRIPRPAFTVSSVKHFYAAVKSASDKLSKLGEVWKLFRIRSDTVTVYCNSVSQVELV
ASGMERADFKVAATHTGMPQHCIEETNRAFRQRGLLLITNIIYSGRQHVINFDMPESADG
YLARAGVHRILWTRKVVSICSELEVCLMHEFERSLGFEVDLLVAKDHRLNGKKPPRRKRV
ITEQIFQS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcccgtgtgtttccatcggcaggcggcggcgctggagctcctggtgccgtca
agcatcccttttctccttcattcggtgctatcccgcaggcaagctccaattcaatcgcag
cgagagcctgatgctttctctctcgaggatttcctctttggttaccatggcatcatcctc
aactgctctgtcatccctggcaacttgtccaagcacagtatctgggacaacatctgttcg
atctaccgcggaattgagcgctgcaaagagttcaaggacgctccgcctccggtcaagtcc
gtgcgcctcctcgagctactgctgcgtttggtcaggccaagatccaacgtctttgacaac
atgctcgtcgtcacagctccagccaatgtgaaacactttgtggaggttttgcgttgctac
taccacccttggaagctggtgggaagcatggaggagcaccagtggatgctggatcgtctg
gatatagttgtggcgagcccccaagaggctcgcaagctgaaggccagcatgacacttcta
gcgcttgttcttgttgacgacgacaaccccgagtttttcagccgagttatggacctgata
gagtccctcctgtttttcagtctcccggtatcactgaaaccttctccttgcaggcctgcc
aagttggatgtaatcaattaccttgctccctgggaagcgatcaacatgagcaaagagcta
ttgcgggcgatagagttgtcactcccagaagcagcgtgctgctctggtttccttgacccg
tgcttctgcaatgcggtccagaatttctccgtgtttcgacgcaacgttgtgtgccaggac
tggtctggcatcctggccttcatgccgggcctcattcccgattcaacaagcaccgcctca
atagttctcgctccaggccaccggattcctcagcttttggagctgttgcaggccttcgtg
gacggcctgggactgtttgaagttaaggtgacttacctcagcgagccagcgatcatgaat
gaactttcacccggaattgtactcgggactccggacaggatgcaggaagcactgtgcggg
gccagcacgacttggaagccacacagagccgttctcgtagaaaccaatgtgctggtttcc
acacagaaagtacatgtggaggcaatatgctccatcctttggagccgagacgtgatcttg
gggatccactccctagacccatctcctggtgtagaagatatcgtcacaaggttctgcaag
ggcgagacgagcaggattcccaggccagccttcaccgtaagctcagtcaagcacttctat
gcagctgtcaagagcgctagtgacaagctctccaagctcggggaagtgtggaagttgttt
cggatcaggagcgatacagtgacagtgtattgcaactcggtatcgcaggtggaactggtt
gcttctgggatggaacgtgcggattttaaagtggctgcaacgcacactggcatgccgcag
cactgcattgaagagacgaatcgggcttttcgccagcgtggtttgcttctaatcaccaac
ataatctacagtggaaggcagcatgttatcaactttgacatgccggagtccgcggatggg
tatttggcgagagcaggcgtgcacaggatcctttggacgagaaaggtggtgagcatctgc
tctgagcttgaagtttgtttgatgcacgagtttgaaaggagccttggtttcgaggttgat
cttctggttgcaaaagaccatcgtctgaatggaaagaagccaccgcggagaaagagggta
atcacggagcagattttccagtcctga
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