Selaginella moellendorffii: SELMODRAFT_412239
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Entry
SELMODRAFT_412239 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K20353
COPII coat assembly protein SEC16
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_412239
Membrane trafficking [BR:
smo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
SELMODRAFT_412239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
S1
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
9640228
NCBI-ProteinID:
XP_002971492
JGI:
412239
UniProt:
D8RKI5
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MGGDQCIHKRSQITQEITSWRLQHSIVLGLADKPCPMDSHCSLRGNVHMTESIIRYVQEV
KDNWAWLVLSPHLKGCLFSELERFKERFKVGDPFQCHIRSVNHERKQVDFALHPKTSDEQ
FKKGDLLGRRITRVFAGVGGHTVQGRWESFGKVHVTIHGLMTQPVYLQRDSSVFVKNVME
KGCFVVLAPSLEARIQLKNLLNSFVQNPAEMFPPGKVILGRILSIEPLSGHIEMSLAATT
SQDSSGWKKFGAGEIVSGRIHNIEAFGIFISLAESDVFLVCAPGCLCHVSEVSYDFIQDL
STLYKVGQWAQVKILKVDVETKRISLGMKASYLTPEDGIEPMEEEAINEEPSNTNVLMDN
DEREEEDYLDLASKRFPQLCINPLSTKTLRIQLCLIGADHCKYPRTYASPEAIQRMEVYE
FARVTSNSQFILLPFQPYKLIYASMLAEAGKINKALRYCQAVLKTLKTAGHAADVCKEAA
VALEERLHIHSQGGSTSIVQRFFGNIGLHKMIGPSPPKASDNADINNRPATASSRSSVSL
ASSASMEPISDNTRRSNMPARSISEPDFRPAQIISPAKGTPNRGVFTSFVQRAMGFIKTP
SKEAKLGNSNKFRYNETLKHWVEEGAEAQAPELPLAPPPMANKLVSRMEENGAPISMSLE
RPQPTPERPQPVVSGIPPMPPSSNQYAAHAHQNVRSRYRFGHSQDSNLMRFLQICRYIQQ
RYSGFCGLHKMAKASAKPLAPTRFFVPAAAAAAAPDINSNTVDPSSAPDFVSDMAFSNGN
GAFAQPVVQDMRNDPGPTPDHLSSSSSPAMFYSNRYPAALSTVSLPPPPVLEVTPLVMVE
QQQQNQRQESSIHRHHHQQSGTVGFEAASSSRVFGDDLQEVEL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgatcaatgcattcacaaaaggtcacaaataacccaagaaatcacctcatgg
aggctgcaacactcaatagttctaggactggcagacaagccctgtcccatggacagccac
tgctccttacgtgggaatgtgcacatgacagagtcgattatcagatacgttcaagaagta
aaggacaactgggcatggctagtcctctcaccccatcttaaaggctgccttttttcggag
cttgaacgttttaaagagcgcttcaaagtcggtgacccgttccagtgccatataagaagt
gttaaccacgaaaggaagcaagtggattttgctctacacccgaaaacaagtgacgaacaa
ttcaagaaaggcgacctgttaggccgacgaatcacacgagtttttgctggtgttggcgga
catactgtgcaaggcagatgggaaagtttcggaaaagttcatgtaacgatacatggattg
atgacccagccagtttatttacagagggacagttcggtttttgtcaaaaatgtgatggag
aaaggttgttttgtggtcctggcaccttcacttgaagctagaattcaactgaagaaccta
ttgaactcgtttgtacaaaaccctgcagaaatgtttccaccaggcaaggtgatattggga
agaattttaagcatcgagccattgtctgggcacattgaaatgtctttggcggcaacaaca
tcacaagattcaagtggctggaagaagtttggtgctggagagatcgttagtggccgcata
cacaacattgaagcatttgggatcttcatcagccttgccgagagcgatgtgttcttagtc
tgtgctccaggttgcttgtgtcatgtctctgaagtgtcttacgattttattcaagacttg
tcaacactttacaaagtcggccaatgggctcaagtaaagattctaaaggttgatgtggaa
accaaacgtatatctcttggaatgaaagcgtcatatctgacccctgaggatggcatcgag
ccgatggaggaagaagctataaatgaagagccttcgaacacaaatgtgctcatggataat
gatgagagggaggaggaggactacttggatctggcatcaaaacgattcccacagctatgc
atcaatccactctcaacaaagacgttgaggatacaactttgtcttataggtgctgaccat
tgtaagtatccacgcacgtacgctagtccagaagctatccagcgaatggaagtgtacgaa
tttgcaagagtgaccagcaattcccagtttattttacttccttttcagccatacaagctt
atttatgcgtcgatgcttgctgaagctggaaagataaacaaagctttaaggtattgccaa
gcggtgttgaaaacattgaaaacagcgggccatgcagctgatgtgtgcaaagaagcggct
gtagccttggaagagcgtcttcatatccactctcagggaggctcaacgtcaattgtgcaa
cggttttttggcaatattggtctacacaagatgataggcccttcgcccccgaaagcttcc
gataatgctgatattaataaccgtcctgcaacagcttctagcagaagcagtgtatcactt
gcctcatcggcatcaatggaacccataagtgataatacgagaagatccaacatgccagcg
agaagcatttctgagcctgactttaggcctgcacagatcattagtccagctaaaggaaca
ccaaacagaggcgtctttacttctttcgtgcaaagagcgatgggcttcataaaaacacct
tcgaaggaggcaaagcttggcaacagcaacaagtttagatacaatgagacactgaagcac
tgggttgaagaaggagctgaggcacaagcaccagagcttccgttggctcctcctcccatg
gcaaacaagctcgtctcacgcatggaggagaatggcgctcctatttccatgtcgctggag
agaccacagccaactccagaaaggccacaaccagttgtgagtggaatcccaccaatgcct
ccgagcagtaaccagtacgcagctcatgcacatcaaaacgttagatcaaggtaccgtttt
ggtcattcccaggactccaatctcatgaggtttttacagatatgtcgatacattcaacaa
agatatagtgggttttgtggattgcacaaaatggcaaaggcaagcgcaaagcctttggct
ccaacgagatttttcgtgcctgcggccgctgctgccgctgctccagatatcaacagcaac
acagtggatccttcctcggcaccagactttgtctctgacatggcattctcaaacgggaat
ggagcattcgctcagccggttgtacaggatatgagaaacgatccggggccaacgcctgat
catctctcgagcagctcttcaccagcaatgttctattcgaatcgctatccagcagcactg
tcgaccgtctcgttgccgccacctccagtgctggaagtcactccgctagtgatggtcgag
cagcagcagcaaaaccaacgccaggaaagttcgattcatcggcaccaccatcaacagtct
ggcacagtgggattcgaagctgccagttcctccagagtgtttggagacgacttgcaagag
gtggaattgtaa
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