Selaginella moellendorffii: SELMODRAFT_412683
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Entry
SELMODRAFT_412683 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_412683
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
SELMODRAFT_412683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
F-box
BRF2-like_C_cyclin_rpt
Kelch_6
Lon_lid
F-box-like
Motif
Other DBs
NCBI-GeneID:
9650202
NCBI-ProteinID:
XP_002972152
JGI:
412683
UniProt:
D8RL51
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MEEEASAAVWKDLPDALIERVLTLVPLPRLLQMRAVSKEWSLLILSQGFINLCARMDRSA
GGGGGGDSSFFLFFTATGPGGAAVIAALSPVSGCWQPLSLDPIFGMEMEVSVVASGGGLL
CLTAASRIIACNPLTRSWRLLPEIPGCSRLLPLLTAIQIDQKGGYKILVAGPGGWSDQRT
FVFDSTTPSAWARKGDLPIDVLDLESEGVVSAGFLYVTCLIPRCRLLAFDFARGEWSKTQ
IPLPAGIASSNLVSCGEEVHLVAALGEAIRIWKLGKEAPSWDLVEEMPRELCCCFLDGGA
GRDSFRCAGRGSWIFVLSYDGVLGSWAMAEDCSACGRAGTVTTDPLSGLFCCCECGVVVD
DDALGSDHQVGLVGERGGTLVAGEGIGALPGKRFLYRNGGSDQYFAKKKQDALRRIRDVA
AALRLQPNDADEVEAMVDRATNGDWGSGRWFDALVGACAYVVVRNHRLPLTLVEVAYASD
CGVRELGRVLGKLVREFAMALPQEDPIVFLERLVLTHAGFSKLSRDAARKIIGQCRVLLE
WMATWFVSTGRHALPAAAAALVIVADANRIEIGLEEVSSELHSPVATSMKRFREIQEALV
STMKTFPWCKTVVTTKNISCHLCFMLRYLETSLKLGKTRRREDSSAIDRVQDEDQSHSKN
KKLRHLPEESPVLPVSFIASRSSRCARVVKAELATQRIASAKRSLARGMPVDKDRPEGGL
DCEDMTIESLLLRGVTRDQIEQGYYESLIADLAPGGDDQPISDDELAKYFYTKDEASRLA
QQIKLQNILSAEREKLRPL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggcgagcgccgccgtgtggaaagatctcccggatgcgctgatcgagcgc
gttctcacgctggtgccgctgcccagattgctgcaaatgcgcgccgtgtccaaggagtgg
agcctgttgatcctctcgcagggcttcatcaatctgtgcgcccggatggatcgatccgcc
ggcggcggcggcggcggggattcgtccttcttcctctttttcaccgccacggggccgggc
ggcgccgccgtgatagcggcgctcagccccgtgagcggctgctggcagcctctctctttg
gatccaatctttgggatggagatggaggtctcggtcgtggcgtctggcggagggctgctg
tgcctcaccgccgcgtcgcggatcatagcgtgcaatcctctcaccagatcgtggaggctg
ctgccggagatccctggctgctcgcggctgctgccgctgctcacggccatccagatcgat
caaaagggcgggtacaagatcctcgtcgcggggccgggcgggtggagcgatcagaggacc
tttgtgtttgattcgaccacaccctcagcgtgggcgcgcaagggggatctgcccatcgac
gtgctggatctcgagagcgaaggcgtggtgagcgccggattcctctacgtgacgtgcttg
atcccgcgctgccggctcctggcgttcgattttgcccgcggcgagtggagcaagacccag
atccctctccccgccgggatcgcgagctccaatctggtgtcgtgcggcgaggaggttcat
ctcgtcgccgcgctgggcgaggcaatccggatctggaagctcggcaaggaggccccatcg
tgggatcttgtggaagagatgccgcgggagctgtgctgctgctttctggatggcggggct
gggagagattccttccgatgcgccgggcgcggctcctggatctttgtcttgagctacgat
ggcgtgctcggttcttgggccatggcggaggattgtagcgcctgtgggcgcgccggcacc
gtcacgaccgatccgctctccggcctcttttgctgctgcgaatgcggcgtggtcgtggac
gacgacgccctgggctccgatcaccaggtagggctcgtcggtgagcgcgggggaactctc
gtagccggcgaagggatcggagctctccccggcaagcgattcctctatcgcaacggtggc
agtgatcagtatttcgcgaagaagaagcaggatgcgctgcggcggatccgggacgtggcg
gcggcgctgaggctccagcccaacgacgccgacgaggtggaggctatggtggatcgcgcg
acgaatggagactgggggtctgggagatggttcgatgctctagtgggcgcttgcgcctat
gtggtggtgaggaatcacaggcttccactgacgctggtggaggtggcctacgcgagcgac
tgtggcgttcgcgagctcgggcgagttcttggcaagcttgtcagggagtttgccatggcg
ctgccgcaggaggatcccatcgtcttcctcgagcgcctggttctcacgcacgctggattc
tcgaagctaagcagggatgccgcgaggaagatcatcgggcagtgccgggttcttctcgag
tggatggcgacttggttcgtgagcaccgggcgtcacgcgctccccgctgccgcggccgcg
ctggttatcgtggcggacgcgaacaggatcgagattggcctggaggaggtctcgagcgag
ctgcactcgccggtggctacgtccatgaagcgcttccgcgagatccaggaggcgctcgtc
agcaccatgaagacgttcccgtggtgcaagacggtcgtgaccaccaagaacatatcgtgc
cacttgtgcttcatgctgcgctacttggagacgagcctcaagctgggtaagacgaggagg
cgagaggactccagtgccatcgatcgggtacaagatgaggatcaaagccactcgaagaac
aagaagctgaggcatttgccagaggagagcccggttctccccgtgtctttcatcgcgagc
aggagctcgcggtgtgcgagggtcgtcaaggcggagcttgctactcaacgcattgccagc
gcgaagcgatccctggccagaggaatgcctgtggataaagatcgaccggagggcggactg
gattgcgaggacatgacgatcgagagccttctcctgcgtggagtaactcgggatcagatc
gagcagggatactacgagtcgctcatcgccgatcttgctccaggcggcgacgatcagccc
atctctgacgacgagctcgccaagtatttctacaccaaggacgaggcatcgcggctggcg
cagcaaatcaagctccaaaacatcctaagcgcggagagagagaagctccgaccattgtaa
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