Selaginella moellendorffii: SELMODRAFT_412711
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Entry
SELMODRAFT_412711 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_412711
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
SELMODRAFT_412711
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SELMODRAFT_412711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM
Radical_SAM_C
Motif
Other DBs
NCBI-GeneID:
9650357
NCBI-ProteinID:
XP_002972171
JGI:
412711
UniProt:
D8RL87
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MAVERRKLTPGRGGVVQQRLSEDEARVRAIAEIVGAMVEGCRSGEDVDLNALKSAACRRY
GLARAPKLVDMIAALPENERDLVLPRLKAKPVRTASGIAVVAVMSKPHRCPHIATTGNIC
VYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQARGRVDQLRRLGHIVDKVECIL
MGGTFMSLPADYHDYFIRNLHDALSGHTSRNVEEAVRYSEHAAIKCIGLTIETRPDYCQS
PHLRQMLSYGCRRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPNF
PNVDMERDMESFRDFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYKNYPPEQLVNLV
PRVLSLDIHNQIKPEEVELVRLDYCANKGWETFLAYEDTRQDILVGLLRLRKCGPNATCP
ELLGRCSIVRELHVYGTAVPVHGRDADKLQHQHIAQRDLMTAHIVFKSC
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggagcgcaggaaattgacaccgggacggggaggcgttgtccagcagcggctg
agcgaggacgaggccagggtacgggcaattgcggagattgtaggggctatggtggaagga
tgccgcagcggtgaggacgtcgatctcaatgcgctcaaatccgctgcttgccgccgctac
ggccttgcccgagcgccaaagctcgtggacatgatcgcggcgttgccagagaatgagcgc
gatctcgtcctgcccaggctcaaggccaagccagtgcgcactgcctctgggattgccgtg
gttgccgtcatgtccaagccgcatcggtgcccacacatcgccacgactgggaatatctgt
gtctactgcccgggaggcccagattcggacttcgaatatagcacacagtcctacactggg
tatgaaccaacgagcatgagagcaattcgagcaaggtacaatccttatatacaggctcga
ggtcgagtggatcaactcaggcgtctgggccatatcgtggataaggttgaatgtatcctt
atgggaggtactttcatgtctttgccagcagactaccacgactattttatccgaaatctc
catgacgctctgtctggtcacacctctcgaaatgtggaggaagccgtgagatactcagag
catgctgccatcaagtgcattggactgaccattgagacgcgtcccgactactgtcagtct
cctcacttgcgccagatgttgtcttatggctgtaggcggcttgagattggggtgcagagc
acgtacgaagatgtcgctcgagatactaaccggggccatacggttgctgctgttgccgac
tgcttttgccttgccaaggacgctggctttaaggtggttgctcatatgatgcctaacttt
ccaaacgtcgatatggaacgggacatggaaagcttccgcgatttttttgaaaatccttcc
tttcgagcggacggcctcaaaatctatccaacgctggttattcgagggacaggtttgtac
gagctatggaagactggaaggtacaagaactatccacctgaacaactcgtcaatctggtt
ccccgagtgttgtctctggatatacacaatcaaatcaagcctgaagaagtagagctagta
aggcttgactactgtgctaacaaaggctgggagacgtttctggcctatgaagacactaga
caggatatactggtgggtttactgcgcctgagaaaatgcggtcccaacgctacatgcccc
gagctgctgggaagatgttcgatagttcgcgagctgcacgtttatggaactgcggtgcct
gttcacggccgtgacgccgacaagctacaacaccagcatatagcgcagcgagatcttatg
acagcacatattgtatttaaaagctgctag
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