Selaginella moellendorffii: SELMODRAFT_412723
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Entry
SELMODRAFT_412723 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_412723
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
SELMODRAFT_412723
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SELMODRAFT_412723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
Acetyltransf_7
Acetyltransf_1
Acetyltransf_10
UBA_SIK3
FR47
Motif
Other DBs
NCBI-GeneID:
9650365
NCBI-ProteinID:
XP_002972179
JGI:
412723
UniProt:
D8RL98
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MIAALPENERDLVLPRLWDCHGCRHVQAASVPTHRLSVSAAREAQIRTSNIAHSPTLGTI
LIYRLEVEWINSGVWAIAWIRLNISLWVSLPADYHDYFIRNLHDALSDHTSRDVEEAVVA
HMMPNLPNLDMERDMESFREFFENPSFRADGLKIYPTLVIQGTGLYELWKTGRYKNYPPE
QLVNLVARVLSLVPPWTRVYHIQHDIPMPLVRSGVEKGNLRELALMRMEDLGLKCKDDIN
NQIKPEEVELVRRDYCANKGWETFLAYEDTRQDILEGLLRMRKCGPNATCPELLGRCSIV
RELHVYGTVGYGTLLMEEAERIARKEHRSVKLAVISGVGTRHYYRKLGYELEGPYMTKRL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggcgttgccagagaatgagcgcgatctcgtcctgcccaggctctgggattgc
catggttgccgtcatgtccaagccgcatcggtgcccacacatcgcctatctgtgtctgct
gcccgggaggcccagattcggacttcaaatatagcacacagtcctacactgggtacaatc
cttatatacaggctcgaggtcgagtggatcaactcaggcgtctgggccatagcgtggata
aggttgaatatatccttatgggtgtctttgccagcagactaccatgactattttatccga
aatctccatgacgctctgtctgatcacacctctcgagatgtggaggaagccgtggttgct
catatgatgcctaaccttccaaaccttgatatggaacgggacatggaaagcttccgcgag
ttttttgaaaatccttcctttcgagcggacggcctcaaaatctatccaacgctggttatt
caagggacaggtttgtacgagctatggaagactggaaggtacaagaactatccacctgaa
caactcgtcaatctggttgcccgagtgttgtctctggtacctccctggactcgggtctat
cacatacaacatgacatccccatgcctcttgtaaggtcaggcgttgagaagggaaacctg
cgagagctggcattgatgaggatggaggacttgggcttgaaatgtaaagatgatataaac
aatcaaatcaaacctgaagaagtagagctagtaaggcgtgactactgtgctaacaaaggc
tgggagacgtttctggcctatgaagacactagacaggatatactggagggtttactgcgc
atgagaaaatgtggtcccaacgctacatgccctgagctgctgggaagatgttcgatagtt
cgcgagctgcacgtttatggaactgtgggttatggaactcttttgatggaagaagccgag
aggatagctcgcaaggagcatcgatccgtgaaactggcagtgatatccggagtgggaact
agacactactacaggaaactaggctatgagctagaaggtccctacatgacgaaaagattg
taa
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