Selaginella moellendorffii: SELMODRAFT_41328
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Entry
SELMODRAFT_41328 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SELMODRAFT_41328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_41328
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_41328
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SELMODRAFT_41328
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
SELMODRAFT_41328
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
SELMODRAFT_41328
Bloom's syndrome complex (BTR)
SELMODRAFT_41328
FA (Fanconi anemia) pathway
SELMODRAFT_41328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
9634425
NCBI-ProteinID:
XP_002991022
JGI:
41328
UniProt:
D8T620
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
LEDLLQRYFGHSSFRGLQLDAIEAVLAGKDCFCMMPTGAGKSLCYQIPALAKPGIVLVVS
PLIALMEDQVAALKSRQIFAEYLSSSQPVKMRNKIFEELQSGKPNLKLLYVTPESVATNH
LMQKLRKLHERSLLSLIAIDEAHCISSWGHDFRPSYRKLSALRTSLPDIPILALTATASK
KVQEDIIKSLSLQKAAVLISSFNRANIFYEVRFKDLMTSAYEDLRNIITKAPTRCMIIYC
HARAMCDEIGSRLKSDGISCRVYHAGINVKARSQALQDWVLGEVHIIVATIAFGYGIDRK
DVRMVCHFNMPKSLESFYQESGRAGRDGKPAKSILYYSVDDKRTMEYVIRSSSQRQQGGI
SENGENELLKKNIEAFEKVVAYCEEASCRRRRVLEHFGENVSPLLCSKTCDACKWPEKLS
RDLKELADASCFNSVWHLLFTCCRDCSSPNDKSEFWNYDNEDVDEHDAEDDISDSEESRE
KSCSFAACRGRTKSQTTKGKLNLLLASHSIIWFLYKQKKSAQNNLVTEELRSTSRARLEN
TVRAAIERLGCADAVNTTAAASALEIECHEKFGKFGRSFYHSQVASKVRWLSACSASELI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
ctcgaggatctcctccagcgctacttcggccactcgagcttccgcggattgcagctcgac
gcgatcgaggctgttctagcaggcaaagattgcttctgcatgatgccgacgggtgccggg
aagtctctctgctatcagattccagcgctggcaaagccaggaattgttcttgtggtttcg
ccattgattgcattgatggaagatcaagttgctgctttaaaatcccgtcaaatatttgca
gagtacttgtcatcgtcacaacccgtgaaaatgaggaacaagatattcgaggagcttcaa
tctggtaaaccgaatttaaagctgctgtatgttactccagaatcggttgcaaccaaccat
ctcatgcaaaagctgagaaagcttcacgagaggagccttctgtctctgattgccattgat
gaggcgcattgtatatcatcctggggacacgacttcagaccaagctatcggaagttgtca
gccttgagaacaagcctacctgacattccaatactagctctaacagcgacagccagcaag
aaggtgcaagaagacatcatcaaatcacttagtttgcaaaaggcagcagttttaatatcg
tcttttaatcgtgcaaatattttctatgaagtgcgcttcaaggacttgatgacgagtgct
tacgaggatctgcgaaatataatcacgaaagctccgacgcggtgcatgattatttactgt
catgctcgcgccatgtgcgatgaaataggctcgcggttaaaatcggatgggatctcgtgt
cgagtatatcacgcgggtatcaacgttaaagctcggagccaggcattgcaagactgggtt
cttggagaagttcatattattgtggcgactatcgcatttgggtacggaatagatcggaag
gatgttaggatggtgtgtcattttaacatgcccaagtcgctcgaatccttttaccaagag
tcgggacgcgcaggtcgtgatggtaaacccgccaaaagtatactttattacagtgtcgac
gacaagcgaaccatggagtacgtcataaggagttcttctcaaaggcaacagggtggaatt
agtgagaatggagagaatgagctgctaaagaaaaatatcgaagcttttgaaaaggtagtg
gcctactgcgaagaagcaagctgccgaaggcgtagagtactggaacacttcggagaaaat
gtctctcctttactatgcagtaagacgtgtgatgcatgtaagtggccggagaaactctct
agagatttgaaggagcttgcggatgcttcgtgtttcaactccgtatggcacttattgttt
acttgttgcagggattgttcttcgccgaatgataagagcgagttttggaattacgacaat
gaagatgtggacgaacacgatgcggaagacgatatatcggactctgaagaaagtcgagaa
aagagttgcagctttgctgcgtgccgaggaagaacaaaaagccaaacaaccaaaggtaag
ctgaatttgcttttggcttcgcactcaataatttggtttttgtacaaacagaaaaaatca
gctcaaaacaatttggtaaccgaggagctccgctctacatcacgagcacgcctagaaaac
acagtgcgagcagccatcgagcgccttggttgtgcggacgctgtcaacacaacagcagca
gcatcagcgttggagatcgagtgccacgaaaagttcggcaaatttgggaggagtttttac
cactcccaagttgctagcaaagttagatggctctccgcttgctcggcctcagagctaatc
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integrated database retrieval system
