Selaginella moellendorffii: SELMODRAFT_413341
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Entry
SELMODRAFT_413341 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08518
syntaxin-binding protein 5
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_413341
Membrane trafficking [BR:
smo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
SELMODRAFT_413341
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
SELMODRAFT_413341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
DUF7165
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
9636559
NCBI-ProteinID:
XP_002972980
JGI:
413341
UniProt:
D8RP54
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MFKRVIQQKSSGSGEASSPKSVNSLKPTHVDLRLTVHHGIPASASVLAYEPGQRLLAIAS
RDGRIKIFGREGVEVLFKSPANAPCKYLEFVNNEGRLIHVTTRNEIEVWDLSTKELVSSK
TWEADITAFAVIQATAFMYEFFVWYVGDETGQVSVLHFNNEDRCFVEMQYTVPAHLTLSG
LIDTDDSSAPVVIVYGNGVIVLWGLHEAQVLAIRGGTEDQQRKLSGGKSSGSDEEEKEPC
CACWACPSGTLLACGYTDGDIWLWNIPVNPKGKAEKPDVSSSPVLKIILSSEEFRMPVVV
MRWSTSVKSDKGPSGYLYVFGGQEMGMAEVVTVLPVTDPACQMQLPLRGPFADVIILPSG
PSIGNGAMLVLSSPGSLDVYEEANIYDSIKAEKPPAQPVPFQLPLTFSTVTCARLLAIPD
QSIVASIILKIPRLLKGNVPPAFPSGMRWPVSGGNFSSTTVDRRSPPCLYITGHENGLIN
VWDASTPCLYFLASVNNRELVGSELASTCAIDFCPTVGLLAAGDEAGLVFVYTMQGESGE
GTCHFISKNEPSTKREIEYSAGFQCFAILNLHTAPIRSLTIRTDCRCIAIGDDNGLVTLF
DIEACVVRFHGKCGSPSGIVSSCFISLLARDPKSFKQDTIVLVLLKDACIAAIDGSSGKT
IGSGRPNNPSVAISLHVLDPSGSSVKSVSRAPSRKASKRSVVMAVIETDSSGSHIEPAEG
NEEIEEDVKQDDDWTGSDNLVLLCSEDSLRVYSISSVLQGMRTTIRKERLEKPCCAASVF
DSGIHGSGLLLLYDTGDIEIRSLPALEVIKLTSLSESLRWEFGSSPSFFRTFAVASNGRV
TAVDADQEVLFMSVVADENDMRLPGSYPLLYDKDVATATEAAIKASVQAAKKKQSQIQDL
FGGVMKELKHSLGNAVGGERTALELPKLFSKQVSPVASHGTSIVKRLKAAASSESSSNER
HSDRNAEQHTERQTDSPDKETELDIDDIDLGDDDLKSPSPSPSEGSVKKGGVMRKLRSSF
NKGKKKASIKGDEDEERNMLFEGGSTETKQSSKTPTMRTAEEIKAAYGHKRSAVSMFFLQ
SKEPNVVRLVTEHKPEDGRNARQRRELCING
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcgcgtgatccagcagaaatccagtggcagtggcgaggcatcatccccgaaa
tcagtgaatagtctcaagcccacgcatgtggatctgagactaactgttcatcacgggatt
cctgcctcggcctctgtcctcgcgtatgagcccggccagcgtttattggcaattgcctca
agggatggaaggatcaaaatctttggccgtgaaggagttgaagttcttttcaaatcgccc
gcgaatgcgccttgtaaatatctcgagttcgttaacaatgaaggacgattgatccatgtc
acaactcgcaacgaaatcgaggtttgggacttgagtacaaaggagcttgtctcgtctaaa
acgtgggaagctgacatcactgcgttcgcagttattcaagcaacagcatttatgtatgag
ttttttgtctggtacgttggagatgaaaccgggcaggtttctgtactccatttcaacaac
gaggatcgttgttttgtcgagatgcaatacacagttcctgcccatttgacattaagtgga
ttgatagatacggacgactcaagtgcaccggttgttattgtctatgggaacggtgttatt
gtattgtggggacttcatgaagctcaagtccttgccatccgcggaggaaccgaagatcag
cagagaaaactttctggcgggaaatcttcaggtagtgacgaggaagagaaggaaccgtgc
tgtgcgtgctgggcatgcccgtctggcacgctactcgcttgcggctacacagatggtgat
atctggttgtggaacatccctgtcaatcccaagggaaaagcagaaaaaccagacgtttcg
agctcaccagttctcaagatcattttatcttcggaggaatttcgaatgccggtcgtggtg
atgaggtggtctacttctgtcaagagtgacaaggggcctagtggttacctttacgtgttt
ggaggacaggaaatgggaatggcggaagttgtgacggtcttacctgtaacagatcctgct
tgtcaaatgcaactcccacttcgtggaccttttgcggacgtgattatattgcctagtggc
ccgagtatcgggaacggagcgatgttggtgctttcatcacctggttctttggatgtgtat
gaggaagccaacatctacgactctataaaagctgagaagcctcctgctcaacctgttccc
ttccagcttcctttgacgttttctacagtcacgtgtgcgagactgttggccattccagat
caaagtatagttgcaagtattatactgaagattccacgcttattgaagggtaacgtgcct
cctgcgtttccatcaggaatgagatggcctgtcagtggcggaaacttcagctctactacc
gttgacagaaggtcgccaccctgtctctacataactggtcatgaaaatggtctgatcaac
gtttgggacgcttcaacaccatgtctctattttttggcgtcggtgaataatagagagctg
gtaggatcggaattagcctccacatgtgctattgacttctgtccaacggttgggctgcta
gcagctggtgacgaggctggtcttgtttttgtatatacaatgcaaggcgaatcgggggaa
gggacgtgccattttatcagcaagaacgagccatcgacaaaaagagaaatagagtattct
gctgggtttcagtgttttgctattctaaacctccacacagcaccaatcagaagcttaact
atcagaaccgactgtcgttgtattgcaattggcgatgacaatggattggttaccttgttc
gatatcgaagcttgcgtggttcgtttccatgggaaatgtgggagtccctcaggaattgtc
tcgtcttgttttataagtcttctagcacgcgacccaaaatcgttcaaacaagacactatt
gtgcttgtgttactgaaggatgcgtgtattgctgcaattgatggcagcagcgggaagact
attggctctggtcgtcctaataatccttccgttgcgatttctctacatgttctcgatcca
tcaggatcgtcagtaaaatcagtatctcgagctccttcaaggaaagcctctaaacggtcc
gttgtaatggctgttattgagactgacagctcaggtagccatattgaacctgccgaaggg
aacgaagaaatagaggaggatgtgaaacaggacgacgactggacaggatctgacaacctc
gtactattatgctctgaagattcattgcgcgtgtattctatttcatctgttcttcaggga
atgcgaacaacaattagaaaagaaagacttgaaaagccttgctgcgcggcatcggtattt
gatagcggaatacacggctccggtcttcttcttttatatgataccggtgatattgaaatc
cggtcgttaccagcgttggaggttatcaaattaacctcgctaagtgagtctttacgttgg
gaatttggcagcagtccaagcttcttcagaacttttgctgtagcatccaatggacgtgta
actgcagttgatgcagatcaggaggttttgtttatgtcagtcgttgcagatgaaaacgac
atgaggttaccgggctcttacccgctactatacgataaagatgttgccacagcaacagaa
gcagccatcaaagcgagtgttcaagcagccaagaagaagcaaagtcagatccaggatctt
tttggcggagttatgaaagaattaaagcattctctaggcaatgctgtgggcggggagcgt
acggcccttgagctccccaagcttttctcgaagcaagtgtcaccggtcgcctcccatgga
actagtatagtgaaaaggctgaaggcggctgcgagttcagagtcttcttccaacgaacgc
catagtgatcgaaatgccgagcaacatactgagcggcagaccgacagtcctgataaagaa
actgagttagatattgatgacatcgatctcggtgacgacgacttgaaatcgccatcgcca
tcgccttcggaaggctcggtaaaaaagggcggtgtgatgagaaagttgagaagtagcttc
aacaaaggcaagaagaaagcttctatcaaaggggacgaggacgaggagagaaatatgctt
tttgaaggtggctcaacggagactaaacaatcaagcaaaacgccgacaatgcgaacagcc
gaagagatcaaggcagcctatggtcacaaaagatctgcggtgagcatgttctttctgcaa
tccaaagagcctaacgttgtccggctggtaacagaacataaaccggaggacggaagaaat
gcaagacagcgcagagaactttgcatcaatggctga
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integrated database retrieval system
