Selaginella moellendorffii: SELMODRAFT_413480
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Entry
SELMODRAFT_413480 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_413480
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_413480
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
SELMODRAFT_413480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-RING_5
APG6_N
Motif
Other DBs
NCBI-GeneID:
9636957
NCBI-ProteinID:
XP_002972846
JGI:
413480
UniProt:
D8RPL7
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MSSIVCPVCYEDAKPGSEDLQAIAGCGHVFHELCLQQWLEYCHRKPCCPVCKESCPAKQI
HRLYFLSSDQQSVSHSQNSSATIDAVLGKLESQLSVANAALQAIKQENKHLDDELANLKI
KLEKSECVRRKAMSDLGNCRESSSRLQEEVNRSLEDRTKLIEKNTSLAKELASMKMVADI
SLDEDEILRLANVGQAKNKDNIIDTLTRSLVIRNKSYRDLVNKCSSLGMNETVAIQKANK
ASEQLRILKARVQELEKALEVKENKELRDLKRKIEQSNTNFVAEKQMASTTAEHENKVRH
ETATEDGCFVPKPTNLCSDKALQISIRRDAPICSPILPGDLAKNQEHVCAQDSSTRKRVY
AATSGTSSPRGLTPSSSDKGSFILRGADGRGGRVTILKPPGIKASAHKQSKRARNHGSNE
GLHIEHFFGRAE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatcgtctgtccggtgtgttatgaggatgccaagcctggaagcgaggatctc
caagctattgctggatgcggacatgtgtttcacgagctttgtctccagcaatggctcgag
tattgccacaggaaaccgtgctgcccggtgtgtaaagaatcttgcccggcgaaacagatc
catcggctatactttttatcatccgaccaacaatcagtttctcactcgcaaaacagcagc
gcaaccattgacgcagtgcttgggaagctggagtctcagctctcggtagctaatgcagca
ctacaagcgatcaagcaagaaaacaagcatctcgatgacgagctcgccaatcttaagatc
aagcttgagaaatcagagtgtgttcgacggaaagctatgagtgaccttggcaactgcaga
gaatcctcgtcaaggctccaggaggaagtgaataggagtttagaggaccgcacgaagctg
attgaaaagaacacgtcgctagcaaaagagcttgcttccatgaaaatggtagcagacatt
tccttggacgaggatgaaatcttgcggcttgcaaatgtaggccaggcaaagaacaaggac
aatattattgacacgctcacaagatcccttgtcattcgtaacaagagttacagagacttg
gtgaacaagtgcagctctttgggaatgaacgagacagttgctattcaaaaagctaacaaa
gcatctgagcaactcagaattctgaaggctcgcgtccaagagctagaaaaagctctagag
gttaaagaaaacaaggagcttcgagacctgaagaggaagatcgaacaaagtaatacgaac
tttgtagctgaaaaacagatggcttccacaaccgcggaacatgagaacaaagtcaggcat
gaaaccgctactgaggatggatgctttgtgcctaagcctacaaatctctgctctgataaa
gctctacaaatctccataaggcgcgacgctccaatatgtagcccgattcttccaggcgac
ttggcgaaaaaccaagagcacgtctgtgcgcaagactcgtcgaccagaaagagagtgtac
gccgcaacgagcgggacgagctctcctcgaggattgacaccgtccagtagtgacaaggga
agcttcatactccgcggtgcagatggccgtggtggaagagtgacgatcttgaagcctccg
ggaatcaaagcaagcgcgcataaacaatccaagcgtgccaggaatcacggcagcaacgaa
ggattgcacatagaacacttcttcgggcgcgcagaatag
DBGET
integrated database retrieval system