Selaginella moellendorffii: SELMODRAFT_413794
Help
Entry
SELMODRAFT_413794 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SELMODRAFT_413794
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SELMODRAFT_413794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
9641857
NCBI-ProteinID:
XP_002973241
JGI:
413794
UniProt:
D8RQ86
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MSSASLPPVVLEDNSSYVVISNGFLELTLTNPGGDVTRISYGGITDLLEWRNKETNRGYW
NLVWSLPDGGDKFDVISGTKFTVVSNTEDMVELSFYRPYDSTETMVPLNIDKRFVVLRGR
SGFYTYAIFDRPYGWSDFNLNVVRVAWKLGQDNFDFMAISDTKQRVMPYPQDRYPQNSET
LAYKEAVDDKYQYSGENRSTKVHGWISFDPLVGFWMITPSYEFKTGGPLKQNLLSHTGPT
CLSVFLGSHYGGITLCPKFRDGEAWKKVFGPVFVYLNSSSTDHRSLWEDAKLQGYQFWTQ
ADKFGNFEISNVLPGTYDLYGWVPGVIGDYKKQGDSITISQGGSYDLGSLVYKPPRNGPT
LWEIGFPDRSAAGFFVPSPDSKYVSKLFVYQERFRQYGLWTRYSEIYSSQDLVYTVGSSQ
WPKDWFFIHGVRVKSDGSFEPTTWEIKFWLDLAIKDESYTLRIAIAGSHYGNIKVYVNSL
SSSPCFVTGMFGRDNAIARHGIHGLYRLYSVDINGGLLKRGDNSIYLTQANSRSPFVGVL
YDHIRFEAPCCEIIEEASSSL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagcctcgctccctccagtggtgcttgaagataatagctcttacgttgtcatc
agcaatgggtttctagagctcacactcacaaacccaggaggggacgtgactaggatcagc
tatggaggcatcacagatttgctcgagtggagaaacaaggaaacaaatcgagggtactgg
aacttggtttggagcttaccagatggtggtgacaaatttgatgtaatcagtggaacaaaa
tttactgttgtgtccaacactgaggacatggttgaattgtccttctatcgaccttatgat
tccaccgagacaatggttccactcaacattgacaagcgattcgtggtcctgagaggaaga
tctggattctacacttatgctatcttcgatcgaccttatggatggagtgattttaatctc
aacgtagttcgtgtggcatggaaacttggacaggacaacttcgatttcatggcaatcagc
gacaccaagcagcgagttatgccatatccacaagacagatatccacaaaactcggagaca
ctcgcgtataaagaggctgtggatgacaagtaccaatactctggagagaatcgatcgacc
aaggtccacggatggatctcattcgatccgctagtgggcttttggatgatcacgcccagc
tacgaatttaagactggaggacctctcaagcaaaatttgctctctcatactggcccaacg
tgtctctcggttttccttggcagccactatggcggcatcacgctttgccccaagtttcgc
gacggtgaggcgtggaagaaggtcttcggccccgtcttcgtctacctcaactcctccagc
accgatcatcgatctctttgggaggatgcgaagctccagggatatcagttctggacacaa
gctgataaattcgggaactttgagatatcgaatgtactgcctggaacttacgatctgtat
ggctgggtgcctggcgtgattggagactacaagaaacaaggagatagcattacgatctct
caaggcggttcgtatgaccttggttctcttgtttataaaccacccaggaatggtccaaca
ctctgggaaattggttttcccgacagatcggctgcaggattttttgttccatctccagac
tcgaaatacgtgagcaaacttttcgtgtaccaagaaaggtttcgacagtatggattatgg
actcgatactccgaaatctacagcagccaggatttggtttacactgttggctctagtcag
tggccaaaggactggttcttcatacatggcgtaagagtaaagagcgatggaagttttgaa
ccaacgacgtgggagatcaaattctggctagaccttgcgatcaaggatgaaagctacacg
ctgaggatcgccattgctggctctcattatggaaatatcaaggtgtacgtgaattcatta
tcatcgtcgccttgctttgtgacggggatgtttgggcgagacaatgcgatcgccaggcac
gggatccatgggctgtataggctctacagcgtagacatcaatggggggctcttgaaaaga
ggcgacaacagcatctatctcacgcaggccaacagccgaagtccatttgttggtgtcctt
tacgatcacatccggtttgaagctccctgctgtgaaatcatagaagaagcatcgtcaagc
ctctag
DBGET
integrated database retrieval system
