Selaginella moellendorffii: SELMODRAFT_414577
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Entry
SELMODRAFT_414577 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10683
BRCA1-associated RING domain protein 1
Organism
smo
Selaginella moellendorffii
Pathway
smo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SELMODRAFT_414577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_414577
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_414577
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_414577
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_414577
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
SELMODRAFT_414577
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
SELMODRAFT_414577
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
SELMODRAFT_414577
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
SELMODRAFT_414577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-5_eIF-2B
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
RTT107_BRCT_5
zf-C3HC4_3
zf-RING_5
zf-RING_6
PTCB-BRCT
PHD_NSD
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
9658355
NCBI-ProteinID:
XP_002974243
JGI:
414577
UniProt:
D8RT82
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MAPHLERFGRELKCPICLSLFQQAAVLSCTHCFCKPCILTSLKGMPFCPVCKVPATRREV
RPSPKMDNVVGIYRDIEAAVGITPFASQDPNTHGFHKQTKGGDNSPERGKATKRIPSKKR
VQAPQMVSSGNAKDKEKSRKRKRKAQVEEKEEEALNPVSLNDFENFEAELAKEKTWEFGR
CEAASSSKLQKTAEHNTAQQELPRQSTPLAPFFWLSSQDDPQITQTHPSPDIAANRPSFS
DLKSSEHQSSEQDMEDVSKGHGADSDPFLWTQRACSPELECNAHDDMMNLIVEDSQELDP
YLPIKQFLKGDTDSGKSVIRRARVDPVKVEVPFDKIPWTEKPHAPVSEGPPKEGDVKPVR
SPAKKRNNRISKSPVRQVGNGTVQEREVSPRKSGEVFCAFCQRAGDCSVCGDLMAYKNGL
LFPRNSGAKNVVHKLCAEWAPKVYFIGDENENKLQNLESEIFRARKLKCKSCKRKGAALG
CYWNSCRKSFHYHCAKADSNFKFDTTRFLVLCPVHATGSFSGKRRKSSSETKQKTSRPRG
GKAKKAEAQNCPRKYVFCGSSLDTRDKEQLAKFASATGSLVESSWNHNVTHVLAGPDATG
GARRTLKLLRGILEGKWILQPEWLTACLSTGHFVDEAPYEARVDVQGRLEEGPKQGRLLA
NSEAPKLFTLLDFYFTEFEGSLKTDLETLVRAGGGTVLHRQPVSPSPKTTLVIYPQDSKT
QRKAATSIAEATGAVALEHTWILNSVAGYRLQPLRYKLVIKLQGRGNSMKTKVDNIAEVC
KALGRSPALVTRFFGCELGVLSSYSDDTNTAIVNGSHDTEKLAKLLDKFIAKYVLCYECK
NPETELKVDKMIRLKCAACGHSSEVDLLKNDEVVRKFYCGGGGAAKKATKVAKGPSKKNA
PVVMAKNGDEDDQEDDDGVEWQTDPSKEAAQERLKEQLSSNLGWLL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcatctggagcgcttcggcagggagctcaagtgtccaatctgcttgagtcta
ttccagcaagccgcggtgctttcttgcacccattgcttttgcaagccgtgcattcttaca
tccttgaagggcatgccattctgtcctgtgtgtaaagtccctgccacgagacgagaggtg
aggccttcgccaaagatggataacgttgtgggtatttatcgggatatagaagctgcggtt
ggaatcacaccgtttgctagtcaggatccaaatactcatggatttcacaagcaaacgaaa
ggaggtgacaattcccctgaacgcggaaaagctactaagagaattccttctaagaaaaga
gttcaggcacctcagatggtcagttctgggaatgccaaagataaagagaaatctcgcaag
aggaaacgtaaagcacaagttgaagaaaaagaagaagaagccttgaatccagtgagtctt
aatgactttgagaactttgaagctgagcttgcaaaggagaagacttgggaatttggacga
tgcgaagctgcctcttcgtcgaaactgcaaaagactgctgaacataatactgcgcaacag
gaacttcctcgacaaagtactcctcttgctcctttcttctggctctcctcgcaagatgat
ccacagataacgcagacacatccatcgccggatattgctgcaaatcgcccttcgttcagc
gacctcaaaagctcagagcatcagtcaagtgaacaagacatggaagacgtatcaaaaggt
catggagcggattctgatccatttctttggactcagcgtgcatgctctcccgaacttgaa
tgcaatgctcacgacgatatgatgaacttgatcgttgaggattcacaagaacttgatcct
tatcttcctattaagcagtttttaaaaggtgacacagactcgggaaaaagcgtgattaga
agagctcgcgtggatcctgtcaaggttgaagttccttttgacaagattccttggacggag
aagccgcatgcacctgtatcagaaggtccaccaaaagaaggcgatgttaagccagttcgg
tctcctgcaaagaagagaaacaacaggataagtaaaagtcctgtgcgtcaagttggtaat
ggtactgtacaagaacgcgaagtttctccccggaaatctggagaggttttttgtgcattc
tgccagcgtgcaggcgattgttctgtttgtggagacctgatggcttacaagaacggtctt
ctttttccaagaaatagcggtgccaaaaacgttgtacacaagctttgtgctgaatgggca
cctaaagtctactttattggcgatgaaaatgaaaacaaactgcaaaatttggagtcagaa
attttccgggcccggaagcttaagtgtaagagctgcaagagaaaaggtgcagcattgggt
tgctattggaacagctgtcgtaaatctttccactatcactgtgcgaaagctgattccaac
ttcaagttcgacacgacacggtttctcgtgctttgtccagtccacgcgaccggttctttt
tctgggaaacgaaggaaaagctcctcagaaacaaaacaaaaaacgtcgagaccaagaggt
gggaaagccaaaaaagcagaagcgcaaaattgtcctagaaaatatgtcttctgcggttca
agcttggatactcgtgacaaggagcaactggcaaagttcgcatcagcaacaggatcactc
gtcgaatcatcgtggaaccataatgtgacccatgtgcttgctggtcccgacgcgactggc
ggtgctcggaggacactaaagctcttgagggggattctggaaggaaaatggatattgcag
cctgagtggttaaccgcctgcctatcaactggccatttcgtagacgaggcaccatacgaa
gctcgagttgatgtacaaggcagacttgaggagggacccaagcaaggaagacttcttgca
aactcagaggccccgaagctgtttaccttgctagacttctacttcaccgagtttgagggg
tcactgaaaacggacctggagaccctggtccgagccggtggtggaaccgtgctacatcgt
cagcctgtctctccatctcccaagacaacgctggttatctatccacaagacagcaaaacg
caacggaaagcggcaacctcgatagccgaagctacaggagccgtcgctctggaacacact
tggatcctcaactccgtagccggctaccgccttcaacctttgcggtacaagctagtgatc
aaactccagggccggggcaattccatgaaaaccaaagtcgacaacatagccgaggtgtgc
aaagctctgggacgctcgccggcgctggtgacgaggttctttggctgcgagctcggggtg
ctttcgagctacagcgacgacaccaacaccgccatcgtcaatggctcccacgacacagag
aagctggcaaaactcctcgacaaattcattgctaagtatgtgctgtgctacgagtgcaag
aatccagagacggagttaaaggtggacaagatgatccggctcaagtgcgctgcgtgtggt
cactcgtccgaggttgatctcctcaagaacgacgaggtggtgaggaagttctactgtggc
ggtggtggcgccgctaagaaagctaccaaggtggcaaaggggccgagcaagaagaacgct
ccagtggtgatggcgaagaacggcgatgaagacgatcaagaggatgacgatggagtggag
tggcaaaccgatccttcgaaggaagcggcccaagaacgcttgaaagagcagcttagctct
aaccttggatggttactttaa
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