Selaginella moellendorffii: SELMODRAFT_416061
Help
Entry
SELMODRAFT_416061 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_416061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_416061
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_416061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WDR55
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SCAP
WD_LRWD1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR11_2nd
Beta-prop_HPS5
Beta-prop_NWD2_C
PigL_N
Utp13
Motif
Other DBs
NCBI-GeneID:
9646191
NCBI-ProteinID:
XP_002975911
JGI:
416061
UniProt:
D8RXY5
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MEAASSYVPVGKKQLPKSRNPLTADSKFWRRFKSRIVDEQKFAVTCVDFCPVFPHDFVVT
ASTRVVVYDGASCQVKKTISRFTDLAYSGSFRPDGQLIMAGGETGLIQIFDANSRITLRQ
LKGHSRAVRWVRYSESDKLHVLSGSDDNSVRWWDVASEEAVVKFQEHTDYVRCGSYNPAS
PGIWVTGSYDHTVRMWDTRTAKSVSLLQHDKPLEDVLFFPSGSLLATAGGNMVKIWDVVA
GKVLTVLGNHQKTVKKLKLTTPSESESRLLTASLDGLLKVFDIEDFKVVHAAKYPGPILA
MDVSPSCTSLAVGTASGLLSVRQRKSVISEERATQALEVSGQEQKQVLRPSNFRYFLRGA
AEKASDDDYVLGSTKRALRQEHDWLLLKFRYKDALLAALNTKDPTVVVAVIEELVARKGL
VQAFSNLEVGELEILLAFLTKHVASPKYSRLLVPAAHSVFDTCATSFAASQSLKQQVTKL
KYAVEEEVRLQESLQSFQGMLQTLVQAAVH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgtcgagctacgttcccgtcgggaagaagcagctgccgaaatcgcgcaat
cccctcactgccgattcgaagttctggaggcgattcaagagcaggatcgtcgacgagcag
aaattcgcggttacctgcgtggatttctgtccggtttttcctcacgattttgtggtcaca
gcgtccaccagggttgtggtttacgatggagcttcgtgtcaagtgaagaaaacgatatcg
agattcaccgatttggcgtactctggaagctttcgtcccgatggacagttgatcatggct
ggtggcgaaaccgggttgattcagatcttcgatgccaatagtcggataacgctccggcaa
ttgaaaggtcactccagagctgtgcgttgggttcgctactcggaatcagacaagcttcac
gtgttatctggaagtgatgataattcggtccggtggtgggatgttgctagtgaggaagca
gtggtgaaattccaggagcacacggattacgttcgttgcggttcatacaacccagcgagt
cctgggatatgggtcactgggtcctacgaccacactgtgcgaatgtgggacactcggact
gcaaaatccgtatcgctgctgcagcatgataagcccttggaagatgttctcttttttcct
tctggaagtcttctcgcaactgccggtggaaacatggtgaagatttgggacgtggtggct
ggaaaggttttgacggtcctcgggaatcatcagaaaactgtgaagaagctaaagctaacg
acacctagcgagtcggaatccagacttctcacggcatcgttggatgggctgctgaaggtt
tttgatatcgaagatttcaaggtggttcatgctgcaaaatatccaggcccgatattggca
atggatgtttccccatcgtgtacctcgctggccgttggaacagcatcaggtttgctttct
gtgcgtcaaaggaagagcgtaatcagcgaagagagagccactcaggctcttgaagtcagc
gggcaagaacagaagcaagtgttgcggcctagcaacttcagatattttctacgtggggct
gccgaaaaagcatctgatgacgattatgttcttggtagcacaaaaagagctttgcgccaa
gaacacgactggctattactcaaatttcgatacaaggacgctctgctcgcggctttgaat
acaaaggatccaacggtggtggttgctgtaattgaagaactagtagctcgcaagggatta
gtgcaagcattttcgaatttggaagtaggagaactggaaattcttttggcgttcctgaca
aagcatgttgcgtcgccaaagtattcacggcttttagttcctgctgcccatagcgtattt
gatacatgcgccacaagctttgcagcttctcaatcgctgaaacaacaggttacgaagctg
aaatacgcggtggaggaagaagtgaggttgcaggagtcactgcaatcctttcaaggaatg
ctacagacgcttgttcaagcagcagttcactga
DBGET
integrated database retrieval system