Selaginella moellendorffii: SELMODRAFT_417184
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Entry
SELMODRAFT_417184 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11883
RNA-binding protein NOB1
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_417184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_417184
03051 Proteasome [BR:
smo03051
]
SELMODRAFT_417184
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
SELMODRAFT_417184
Proteasome [BR:
smo03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
SELMODRAFT_417184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
9639039
NCBI-ProteinID:
XP_002977123
JGI:
417184
UniProt:
D8S1N1
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MAVDETRGWAAAARKDAAPPPPMPAFVPRAKSSDGVNTVVVDANALIRGISISGLKYELC
TVKEVVNEVRDPRSRAQLSALPVELAILEPSPESLAKVAEFARATGDIQALSAIDLKVLA
LAHTLEVQVHGGDSHLRNRPPPLVRRVAKKNHEPEPPGWGSNVPNLDEWEEIAEEHEDEG
DKNESHILGLKDLSLGDAQSPCPVTDQGEEDIKECMDCCSDGEVPATDLSPEEARLRSMQ
EEDGVFEDQGKDECKDGNSDDETNGEATTDLSQEEGRLHTMQRREASENVSEDQEEPEGE
EAPSVTDGTESEESWSVLRPLSMSSIACMTTDFAMQNVILQMGLRLLTPNGIQVRELQRW
VLRCHACNTVTRDVGRVFCPKCGNGGTLSRASVSVGPNGTVIGASKRRINIRGTRYSLPL
PKGGREGAAQNPILREDQLPHRILHPKKSSKAPDDDLDYISSFDDVLRPRGKESFQSSAA
SMRNLASQFSGRRNPNDLHYSKHRRR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggacgagacgagaggatgggcagcggcggcgcgcaaggatgccgcacccccg
ccgccaatgccggcatttgtgccgcgagcgaaatcgagcgatggtgtcaacacggtagta
gtggatgcgaatgcgctcatccgggggatttccatctcggggctcaagtacgagctttgc
accgtcaaggaagtcgtgaatgaggtccgggatccacgatcgcgagcgcagctcagcgcg
cttccagtggaattggcgatcttggagccctctccggaatctctagccaaagtggccgag
tttgctcgagcaaccggtgatatacaggctctatccgcgatcgatctcaaggttttggct
ttggctcacactctcgaagtccaggtccatggtggcgattctcaccttagaaatcggccg
ccaccgctcgttcggcgcgtagcgaaaaagaatcacgagcccgagccgcctggctgggga
tcaaacgttccaaatctcgacgagtgggaggaaattgctgaggaacacgaggatgaagga
gacaagaatgagtctcacatccttgggctcaaggatctcagcttgggcgacgctcaaagt
ccatgtcctgtgacagatcaaggagaggaggatatcaaggaatgcatggattgttgcagt
gacggcgaagtacctgccacggatttaagtccggaggaggctcgacttcgtagcatgcag
gaagaagatggtgtttttgaagatcaagggaaggacgaatgcaaagatggtaacagcgac
gatgaaacaaacggcgaagccaccacggatctaagccaggaggagggtcgtcttcatacc
atgcaacgacgtgaagccagtgaaaatgtttcagaggatcaagaagagcccgagggagaa
gaagctccgtcggtgacggatggaactgaaagcgaggaaagctggtcggtgcttcgaccg
ctctccatgtcgagcatcgcctgcatgacaacagacttcgcgatgcaaaatgtgatcctg
caaatgggactgcgtttactcactccaaatgggattcaagttcgcgagctccaaaggtgg
gttctcaggtgccatgcgtgcaacaccgtgactagagacgtgggccgcgtcttctgtccc
aagtgtgggaatggaggaactttatctcgtgcttcggtgagcgtgggaccaaacggcacg
gtgataggagcgtccaagcgcaggataaacattcgtggcacgagatactcgctgcctctg
ccgaagggcggcagggaaggcgctgctcaaaatcccattttgagagaggatcagttgcct
cacaggatcctccatcccaagaaatcgtcaaaagcaccagatgatgatctggactacatc
tcttcctttgacgacgtgctccggcccaggggcaaagaatccttccaaagctccgcagca
tcaatgagaaatctggcctcccagttctccggacgaaggaatccaaacgatttgcactac
tcgaagcaccgacgtcgatga
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