Selaginella moellendorffii: SELMODRAFT_417225
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Entry
SELMODRAFT_417225 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14409
protein SMG7
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_417225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_417225
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
SELMODRAFT_417225
mRNA cycle factors
Common to processing body (P body) and stress granule
SELMODRAFT_417225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
DUF6483
DYH2-5-8_CC
Eplus_motif
Motif
Other DBs
NCBI-GeneID:
9656175
NCBI-ProteinID:
XP_002977294
JGI:
417225
UniProt:
D8S2I9
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MKQRSLAKMPGVSLIKVNHKFVVGDPKNKEIYEELWKIHNGGAGLLSRPRDCARKKPPRR
SSEAGIPSTAASTPPSQAGDLKAKLESKDADLKEVHALRDDGYGPLLAAPSLSPEIEKAL
WKAHHAKITEFRSQMQRAAEKQKSDRVGKKTLKNVVAPLIDFIASSSNFYSELVSRVRVR
HGLGGTVSDSCDKSLDESEAREFRETCHRLLLRLGDLARYKEVYGVSLGKRNYSTAEDYY
VQASRLCHCEGGAHGQLAILATHAGDRVRAVYHYLRSLFVKMPSPTSHSNLLLLLESKSD
AIAEASQGSSNFDNLLRLFEILLLKTGFDNLQKVLDGTLNELERSVGTPSKVCDPAEPTM
GKVFLGIQIVTILACSIEDFHLGLVCKTSPPRSSLHETLACAFKVVRTLAAIGDPTMLPA
LVIFTAGLAGSEDTVRATAESDELRRSFLDALERAESFFQALSVFSEESLSRLSMSQEEL
TQGRRDALWEDHELQGFVPLGRYHESLNFGFHYLACDSKQLDWKRLRRLEASLRALAEMA
GLSKDTTSSQAETVSTSLGSVLDRQLAELKVDTGLSKNTSSSQADEEAATISTNLSSAQL
DDLKVDIADLSKVGFLNEAEEAGSTELEELPVKFSPSLEDSFFAKQFLKSVTGSTDLVLL
EQAPEFPESLEDDHGQGLRDFEDDVIPFPAGDEGATDNSNDEDLQDDIYLPSQSQEDALN
WRSLSSF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacgatcgctggccaagatgccaggagtaagcttgatcaaggtcaaccacaag
ttcgtcgttggagatcccaagaacaaggagatctacgaggagctgtggaagatccacaat
ggtggagcggggctactctcaagaccgagagactgcgcacgcaagaaaccaccccggagg
agcagcgaagccggcattccaagcaccgccgcatcgactcctcccagccaggccggggat
ctcaaagccaagctcgagagcaaagacgcggacctcaaagaggtccacgcgctccgggac
gatggctacggccctctcctggctgcgccttccctcagccccgagatcgagaaggcgctc
tggaaagcccaccacgccaagatcacggagtttcgctcccagatgcaaagagccgccgag
aagcaaaagagcgaccgcgtcggcaagaagacgctcaagaatgtggtggcgcctttgatc
gacttcatagccagcagctccaacttctactcggagcttgtttccagggtgagagtgagg
catggcctcggtgggaccgtctcggatagctgtgacaagagcttggacgagagcgaggcg
agagagttccgcgagacttgtcaccggctgctactgcgcctcggggacttggctcgctac
aaggaggtgtatggagtgagccttggcaagaggaactattccaccgcggaggactactac
gtgcaagcctcgaggctttgtcactgtgaaggtggagcgcatggacagctggcgatcctg
gcgacccatgcgggagatagagttcgtgctgtgtatcactatctgaggagcttgtttgtg
aagatgccgtctccaacgagccacagcaaccttctccttcttctggagagtaagtcggac
gccatcgctgaagccagccaaggatcgtccaactttgacaatctcttgaggctcttcgag
atcttactcctgaaaactggtttcgacaatttgcagaaggtgctggatggcactctgaac
gaactcgagcgatcggtgggaactccctctaaagtttgcgatccagcagagccaaccatg
ggaaaagttttcctgggaatacagatcgtgacgatactagcgtgctccatcgaagacttc
catctcggcctcgtctgtaagacttctccgccaaggagctcgctgcatgagactctggcg
tgcgcattcaaagtcgtgcgcacgctggcggcgatcggcgatccaaccatgctcccggcg
ctcgtcatcttcacagcagggctcgcaggcagcgaggacaccgtgcgggccaccgcagag
tccgacgagctcaggaggagcttcctggatgccttggagcgggcggagagcttcttccag
gcactgagtgtcttctccgaggaatccttgtcaaggctctccatgagccaggaggagctc
acgcagggaagacgcgacgctctctgggaggaccatgagctgcaaggctttgttcctctc
ggccggtaccacgagtctctgaactttggcttccactacctggcttgcgactccaagcag
ctcgactggaaacgtcttcgaagattggaggcttccttgcgagctctcgcggagatggca
ggcttgtccaaggatacaacttccagtcaagcggaaacggtgtccacaagtctgggctcg
gttctggacaggcagctagccgagctcaaagttgatacgggcttgtcgaagaacacttct
tctagtcaagcagatgaagaagcagcaactatatcgacgaatctcagctcagcgcagcta
gacgatctcaaggttgatatagcagacttgtcaaaagttggatttctcaacgaggccgag
gaagcgggatccaccgaactcgaagagcttcctgtcaagttctctcctagtctggaagat
tcattcttcgcaaagcagtttctaaaatctgtaactggatccaccgacttagttcttctt
gaacaagcaccggagtttcctgaatcactcgaggatgatcatggccaaggcctgagggat
ttcgaggacgacgtcataccatttccagcaggagacgaaggtgccacggacaatagcaac
gatgaggatctgcaagacgatatttatctaccctcgcaatcacaggaagatgcgttgaac
tggagatcgcttagctcgttttga
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integrated database retrieval system
