Selaginella moellendorffii: SELMODRAFT_417248
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Entry
SELMODRAFT_417248 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_417248
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
SELMODRAFT_417248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
F-box
BRF2-like_C_cyclin_rpt
Kelch_6
Lon_lid
F-box-like
Motif
Other DBs
NCBI-GeneID:
9639388
NCBI-ProteinID:
XP_002977474
JGI:
417248
UniProt:
D8S2L2
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MEEASDAVWKELPDALIERVLTLVPVPRLLQMRAVSKEWSLLILSQGFINLCARMDRSGG
GGSGDSSFFLFFTATGPGGAAVIAALSPVSGCWQPLSLDPIFGMEMEVSVVASGGGLLCL
TTASRIIACNPLTRSWRLLPEIPGCSRLLPLLTAIQIDQKGGYKILVAGPGGWSDQRTFV
FDSTAPSAWARKGDLPIDVLDLESEGVVSAGFLYVTCLIPRCRLLAFDFARGEWSKTQIP
LPTGIASSNLVLCGEEVHLVAALGEAIRIWKLGKEAQSWDLVEEMPRELCCCFLDGGAGR
DSFRCAGRGSWIFVLSYDGVLGSWAMAEDCSACGRAGTVTTDPLSGLFCCCECGVVVDDD
ALGSDHQVGLVGERGGTLVAGEGIGALAGKRFLYRNGGSDQYFAKKKQDALRRIRDVAAA
LRLQPNDADEVEAMVDRATNGDWGSGRWFDALVGACAYVVVRNHRLPLTLVEVAYASDCG
VRELGRVLGKLVREFAMALPQEDPIVFLERLVLTHAGFSKLSRDAARKIIGQCRVLLEWM
ATWFVSTGRHALPAAAAALVIVADANRIEIGLEEVSSELHSPVATSMKRFREIQEALVST
MKTFPWCKTVVTTKNISCHLCFMLRYLETSLKLGKKRRREDSSAIDRVQDEDQSYSQDED
QSHSKNKKLRHLPEESPVLPVSFIASRSSRCARIVKAELATQRIASAKRSLARGMPVDKD
RPEGGLDCEDMTIESLLLRGVTRDQIEQGYYESLIADLAPGGDDQPISDDELAKYFYTKD
EASRLAQQIKLQNILSAEREKLRPL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggccagcgacgccgtgtggaaagaactcccggatgcgctgatcgagcgcgtt
ctcacgctggtgccggtgcccagattgctacaaatgcgcgccgtgtccaaggagtggagt
ttgttgatcctctcgcagggcttcatcaatctgtgcgcccggatggatcgatccggcggc
ggcggcagcggggattcgtccttcttcctctttttcaccgccacggggccgggcggcgcc
gccgtgatagcggcgctcagccccgtgagcggctgctggcagcctctctctttggatcca
atctttgggatggagatggaggtctcggtcgtggcgtctggcggagggctgctgtgcctc
accaccgcgtcgcggatcatagcgtgcaatcctctcaccagatcgtggaggctgctgccg
gagatccctggctgctcgcggctgctgccgctgctcacggccatccagatcgatcaaaag
ggcgggtacaagatcctcgtcgcggggccgggcgggtggagcgatcagaggacctttgtg
tttgattcgaccgcaccctcggcgtgggcgcgcaagggggatctgcccatcgacgtgctg
gatctcgagagcgaaggcgtggtgagcgccggattcctctacgtgacgtgcttgatcccg
cgctgccggctcctggcgttcgattttgcccgcggcgagtggagcaagacccagatccct
ctccccaccgggatcgcgagctccaatctggtgctgtgcggcgaggaggttcatctcgtc
gccgcgctgggcgaggcaatccggatctggaagctcggcaaggaggcccaatcgtgggat
cttgtggaagagatgccacgggagctgtgctgctgctttctggatggcggggctgggaga
gattccttccgctgcgccgggcgcggctcctggatctttgtcttgagctacgatggcgtg
ctcggttcttgggccatggcggaggattgtagcgcctgtgggcgcgccggcactgtcacg
accgatccgctctccggcctcttttgctgctgcgaatgcggcgtggtcgtggacgacgac
gcgctgggctccgatcaccaggtagggctcgtcggtgagcgcgggggaactctcgtagcc
ggcgaagggatcggagctctcgccggcaagcgattcctctatcgcaacggtggcagtgat
cagtatttcgcgaagaagaagcaggatgcgctgcggcggatccgggacgtggcggcggcg
ctgaggctccagcccaacgacgccgacgaggtggaggctatggtggatcgcgcgacgaat
ggagactgggggtctgggagatggttcgatgctctagtgggcgcttgcgcctatgtggtg
gtgaggaatcacaggcttccactgacgctggtggaggtggcctacgcgagcgactgtggc
gttcgcgagctcgggcgagttcttggcaagcttgtcagggagtttgccatggcgctgccg
caggaggatcccatcgtcttcctcgagcgcctggttctcacgcacgctggattctcgaag
ctaagcagggatgccgcgaggaagatcatcgggcagtgccgggttcttctcgagtggatg
gcgacttggtttgtgagcaccgggcgtcacgcgctccccgctgccgcggccgcgctggtt
atcgtggcggacgcgaacaggatcgagattggcctggaggaggtctcgagcgagctccac
tcgccggtggcgacgtccatgaagcgcttccgcgagatccaggaggcgctcgtcagcacc
atgaagacgttcccgtggtgcaagacggtcgtgaccaccaagaacatatcgtgccacttg
tgcttcatgctgcgctacttggagacgagcctcaagctgggcaagaagaggaggcgagag
gactccagtgccatcgatcgggtacaagatgaggatcaaagctactcacaagatgaggat
caaagccactcgaagaacaagaagctgaggcatttgccagaggagagcccggttctcccc
gtgtctttcatcgcgagcaggagctcgcggtgtgcgaggatcgtcaaggcggagcttgct
actcaacgcattgccagcgcgaagcgatccctggccagaggaatgcctgtggataaagat
cgaccggagggcggactggattgcgaggacatgacgatcgagagccttctcctgcgtgga
gtaactcgggatcagatcgagcagggatactacgagtcgctcatcgccgatcttgctcca
ggcggcgacgatcagcccatctctgacgacgagctcgccaagtatttctacaccaaggac
gaggcatcgcggctggcgcagcaaatcaagctccaaaacatcctaagcgcggagagagag
aagctccgaccattgtaa
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integrated database retrieval system