KEGG   Selaginella moellendorffii: SELMODRAFT_417493
Entry
SELMODRAFT_417493 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
smo  Selaginella moellendorffii
Pathway
smo03018  RNA degradation
smo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SELMODRAFT_417493
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SELMODRAFT_417493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_417493
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_417493
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SELMODRAFT_417493
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SELMODRAFT_417493
Spliceosome [BR:smo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SELMODRAFT_417493
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9639359
NCBI-ProteinID: XP_002977613
JGI: 417493
UniProt: D8RVP0
LinkDB
Position
Unknown
AA seq 101 aa
MSNRKETVLDLAKFIDKGVCVKLSGGRQVIGTLKGYDQLLNLVLDEAVEYLRDHDDPLKT
TDQTRALGLVVCRGTAVMLVAPTDGTEEIANPFVTQDPAVI
NT seq 306 nt   +upstreamnt  +downstreamnt
atgtcgaatcgcaaggagactgtgctcgatttggccaagttcatcgacaagggcgtgtgc
gtcaaactcagtggcgggcgccaagtgatcgggaccttgaaaggctatgaccagctactc
aatctcgtcctggatgaggcagtcgagtacttgagagatcacgatgatccattgaagaca
acggatcaaaccagagctctcggcctagtggtttgtagaggtactgcggtgatgctcgtc
gctccaaccgatggtaccgaagaaatcgccaaccctttcgtgacacaagatccggccgtg
atatag

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