Selaginella moellendorffii: SELMODRAFT_417998
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Entry
SELMODRAFT_417998 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15407
queuine tRNA-ribosyltransferase accessory subunit
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_417998
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SELMODRAFT_417998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGT
RINGv
DUF2704
DUF3720
Motif
Other DBs
NCBI-GeneID:
9653274
NCBI-ProteinID:
XP_002978063
JGI:
417998
UniProt:
D8S4B8
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MNFGAALAPVDTPCLLLSTRRGLPSFVSTDLLPELHPDARVLHVNPVHFLEGPPVSTIHE
IGGGHKLLNLQGNALVSLARDSIVSEPDGEGNTKLGAAFNTSSGRRVIGPAKYMELVNAL
KPNVWASIADELPTWVSQRRNKLSVDRTLQWLDKCLGLQSVGENTSFGTIVGGFFIGGFG
LGESPEDRLTLLQSVTDCLPKDLPRIISGLGMPEEILQAVSTGVDIFDSTYPHTLTKGGY
AMTFPLSMDEKPWKFSLEDGAELGADFTKINLRSIAYRCDVTPLKPGCTCYTCQKHTRAY
INHLLNTHEMVAQTLLDMHNIHHYLSFFQAIRDAICGSYFEEFQHWFIGQRRYCESERPE
VHTHTRRERNLDLSSDKTVMISEPEENETRQARKSEVEQCSQDFVAVDVDETAPSAIKQE
LERLHERRPDSLESNGAAEGRVCRVCHLPLEADVSIELGCSCKNELAVAHQRCAATWFTI
KGSKTCEICGRAAENVSFDRAIARRPDHLVMSVELNVEMQEENSYTVKRALCNLLLSLCV
VIPFLPWLFRGARSQGRSTLQQQGQSRNLLCLAFVFGSLWTKQDRDFNRSVRKACCTHVL
FRDTEEMHGIYVVGLKLIMRLFLSLYAEKEFQISPLGREGFMGDSRQENATDLQHAVEEL
DERKEKIGRSPSQELESTSLSLPAPSIGDVSAGSKAQDPEGGFVAIEIQSLSTNPPPPPT
KGGFEEHKPPQPLGGGDEEDARICRVCHLSLGLKRSSDHEEDPGDPVDEGIASSPIELGC
ACKDDLAFAHRRCAETWFKIKGNRNCEICGQLAHNVAAGADDSSCGRHSDEQSDSIFERA
GDPHRPRSFWQHRPICNFVLAFIVVILLLPWLFRIRLF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaattttggggcggcgctggcgcctgtggacacgccgtgcctgctgctctccacgcgc
cgaggtttgccatcgtttgtctctacggatttgctgccggagctccatccagatgcgcgc
gttcttcacgtcaatccagtgcatttccttgaaggtccaccagtgagcacaatccatgaa
attggtggaggacacaagctacttaacttgcaaggcaacgcccttgtgtccctcgccaga
gactcaatcgtaagcgaacccgacggagaagggaacaccaaacttggtgcagcctttaat
acatcgtccggtcgccgtgtgattggtcctgcaaagtacatggaacttgtcaacgcattg
aagccaaatgtgtgggcttcaatagcggacgagcttcccacctgggtttcccaaaggcgg
aataagctctcagtggatcggactctgcagtggcttgataaatgccttggtttgcaatct
gttggcgaaaatacatcttttggaaccattgtaggaggctttttcataggcggctttgga
cttggggaaagcccagaggatcgtttgacattgctgcaaagtgttactgattgcttgccg
aaagaccttccacgaattatcagtggcctgggaatgccagaggaaattttgcaagcagtc
tctactggtgtcgatatcttcgacagcacctacccgcatacactgaccaaaggaggctat
gcaatgacctttccactgtcgatggacgaaaagccgtggaaattttctctggaagatgga
gccgagctcggtgcagacttcacgaaaataaacctccgatcaatagcttacagatgcgac
gtgactcccctcaagcccggttgtacctgctatacatgccaaaagcacacgagagcgtac
atcaatcacttgctaaacacacacgagatggttgctcaaactttgcttgacatgcataac
attcaccactacctctcgtttttccaagcaatacgcgatgcgatatgtggctcttatttt
gaagagtttcagcactggtttattggtcaaaggcgatattgtgaaagcgagcgtcccgag
gtacacacacatactcgaagggaaagaaatttggatctctcaagtgacaagacagtaatg
atatcagagcctgaagaaaacgagaccagacaggccaggaaatccgaggtcgagcagtgt
agtcaggattttgttgccgtagatgtggacgaaacggctccatcagcaattaagcaagaa
ctagagaggctacacgagcgacgcccggacagtctcgagtccaatggagcagcagaaggc
agagtttgcagagtgtgccatcttccactcgaggccgatgtctcgatcgagctcggctgc
tcctgcaagaacgagctagcggtcgctcatcaacgctgtgcagcgacgtggtttacgatc
aagggcagcaagacatgcgagatatgcggccgggccgccgagaacgtaagctttgatcgc
gccatcgctcgaagacccgatcatctcgtcatgagcgtggagctcaatgtggagatgcaa
gaggagaactcctacaccgtcaagcgtgctctttgcaacttgctgctgtcgctgtgcgtg
gttatcccgttcttaccgtggctcttccggggagctcgctcacagggacgatcaacattg
caacaacagggacagtccaggaatcttctttgcttagcttttgtttttggctcgctctgg
acaaaacaagacagggactttaacaggagcgtacgaaaggcgtgttgtactcacgtacta
ttccgtgacacggaagaaatgcacggaatctacgtggtgggtttaaagttaataatgcgg
cttttcctaagtttatacgcagagaaagagttccaaataagtcctcttggaagagaggga
tttatgggtgattcccggcaggaaaatgccacagatttgcagcatgcagtggaagaattg
gatgagaggaaggagaagatcgggagatctcccagccaggagctggaatcaacatctttg
tccttaccagcgccaagtatcggtgatgtctcggccggatcaaaagcgcaggatccagag
gggggattcgtggcaatagagatccaatccctctccacaaatcctccgcctccaccgacg
aaagggggttttgaagaacacaagccaccgcagcccctcggtggtggggacgaggaagac
gccagaatttgtagagtgtgccatctctcgctcggcctgaagcgctccagcgatcacgag
gaggatccaggcgatccagtcgacgaggggatcgcctccagcccaattgagctcggctgc
gcgtgcaaggacgatctagcattcgcgcaccgccgctgcgcagagacttggttcaagatc
aaaggcaacaggaactgcgagatctgtggccagctcgcccacaatgtggctgctggcgcg
gacgattcgagctgcgggcgacacagcgacgagcaatcggactccatattcgagcgggcg
ggcgatccccatcgcccacgcagcttctggcagcacaggcccatttgcaactttgtgctc
gccttcatcgtcgtcatcttgctcctgccctggctcttccggatccgcctcttctga
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