Selaginella moellendorffii: SELMODRAFT_418097
Help
Entry
SELMODRAFT_418097 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K23336
armadillo repeat-containing protein 8
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_418097
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
SELMODRAFT_418097
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
Cnd1
HEAT_2
ARM_ARMC5
VID28_C
Rce1-like
ARM_PUB
HEAT_GCN1
SIL1_FES1_HPBP1_C
Adaptin_N
PDS5
Vac14_Fab1_bd
PHAT_SMAUG
Motif
Other DBs
NCBI-GeneID:
9653330
NCBI-ProteinID:
XP_002978123
JGI:
418097
UniProt:
D8S4N4
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MPASAVCTKPEDLVESLSSLDTSARLKALRDVKNQIIGNKTKKLSYIKLGAVPRVVEILA
SDTDIPLLVQSAAAVGSFACGTDAGVKAVLDSGVLPHLLRMLSNGNNKVVEASARSLKMI
FQSTLAPKNDMFQGRRIDLILALLNSGNENVSEVAASVLARCCETSEHQKALADAGCLQS
LVFLLSGSPKRKEAALDALAALTRGNPDTSAALAATGAVSTIIRTMKDKSPRARLLACMC
LSNIGRACHNNYQQEWDIRKSILSTVGKLIDENGQVGEEAPGVLADLVANNEELQKTAFD
FNIIERLAEAQCSIAMALGHESEGVRIAACACIKSISRSVKNLRTTLTDERLVWPLFRLL
NDPSPAVQASALSAVSNVVLDFTPHKAVFFQCGGVSQLIQLALSMEPMLRLNAVWALRNL
LYLADMSVKEKVMRELTVSTLVDLVCDSEEMVQEQALAFVRNLVYGSVASVQQIFAADAA
ILHAVERQLCVATRPEICTQALYVLSNVAAGNEYHKDAVMDFVAPALTGDRSVSILIKFL
LDMSNPQLRVAAVWCISNLSFPESPGVGTRVARLRDAGIQLQLQKMFDDPCTDVKDRVKT
TMEQFLCTDQMTSNTGQSVSCRLHPSAALTLSHSSWRSVLAARRKLYCCSNGAANRDAKV
KLRAAPWSCGVVGSTMIIYLGGLHVPLSYSGLSIVSTMLSSDCGLDPQVKAISLVVLQSA
ELCGAVWLIESSIRQFDTRLTCMSFDQMLSGRRGCLLAAVIALSSVILSALAKPGTSVYL
ENNHYDPALKELLASGGVSLCATVAVCCGITPLLEEFVYRGFVLTSLAAYASPPWAIITS
SLIFSLVHFKAPEETLWRDQLVSLAHLVMTEQPRAEVGKAALWRAGDTVGHQRCVAYVEG
LGCLLLLCSQLLHKEGKNKRTY
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgtccgcggtgtgcaccaagcccgaagatctggtggagagcctcagctcgctc
gacaccagcgcgcggctcaaggcgctccgggacgtgaagaaccagataattggcaacaag
accaagaagctgtcctacataaagctgggagctgttccaagagttgtggagatccttgcc
agtgacaccgacattccactcctggtccagtcggctgccgcggttgggagcttcgcatgt
ggaactgacgctggcgtcaaggctgtgctcgacagtggagtactcccccacttgctcagg
atgctctccaatggcaacaacaaggtcgtcgaggccagcgcccggtctctcaagatgata
ttccaatccacgctcgcccccaaaaatgacatgttccaaggccggaggatcgacctcatt
ctagcactcttgaacagtggcaacgagaacgtgtccgaggttgctgccagtgtgttagcc
cgatgctgcgagaccagcgagcaccagaaagcactggccgacgccggctgcctgcagagc
ctggttttccttttgtccgggagtcccaagagaaaagaggccgctctggatgcattggca
gcacttacaagaggtaacccggacacttctgctgcattggccgccactggtgccgtctcc
accatcatcaggacgatgaaggacaagtcacccagggcacgcctgctagcctgcatgtgt
ctttcgaatatcggcagagcttgccataacaactatcagcaagagtgggacattcgaaag
agtattctctcgacggttggcaaacttattgacgagaacggccaagtaggtgaagaagca
ccgggagttttggcagatttggttgcgaacaacgaggagcttcagaagacagccttcgat
tttaacatcatcgaaagacttgccgaggcacagtgctccattgcaatggctttgggacat
gaatcagaaggagttcgaatagctgcctgcgcttgcatcaagagcatctctcggtctgtc
aagaatttacgtacaactttgaccgatgagcgattggtgtggcctctcttcaggctgctc
aatgatccgtccccggcagtccaggcatctgctctaagtgccgtgagcaacgttgtgctc
gacttcacaccacataaagcagtgttttttcaatgcggtggtgttagccaacttatccag
ctagcgttatccatggagccgatgctcaggctgaatgcagtttgggctctgaggaacctt
ctttacttggcagacatgagcgtcaaggagaaagtaatgagggaattgaccgtgtcaaca
ctagtcgacctggtttgtgattccgaggagatggtacaagagcaagcactggccttcgtt
cggaacttagtgtatggcagtgtcgcctccgtgcaacagatatttgcggctgacgctgct
atattgcatgccgtggagagacagctttgtgttgcaactcgacccgaaatatgcacacag
gcactatatgtcctgagtaacgttgctgcaggcaacgaataccacaaggatgctgttatg
gactttgttgctccagctttgactggcgaccgcagtgtatcgatccttatcaaatttttg
ctggacatgagcaacccgcaacttcgtgttgccgcagtctggtgtatatcaaacttgagc
ttccccgagagtcctggggttggcactcgagtggcaaggcttcgggatgctggcattcag
ctgcaactgcagaaaatgtttgacgatccatgcacagatgtgaaggatcgcgtaaaaaca
acaatggagcagtttttatgtactgaccaaatgacctcgaacaccgggcaaagtgtaagc
tgccgacttcaccccagtgcggcgctgactttaagccatagctcatggcgctcagtgttg
gcggcaaggcgcaagctttactgctgctctaacggagcggcaaacagggatgccaaggtg
aaactgcgggctgctccatggagttgtggcgtggtgggtagcacgatgataatctacttg
ggtggattacacgttccgctcagctacagtggcctttctatcgtctcaactatgctaagc
agcgactgtgggcttgatccccaggtgaaggcaatttccttggtcgtgttgcagagtgct
gaattgtgcggggcggtctggcttattgagtcgagcatcaggcagtttgatactagactg
acgtgtatgagctttgatcagatgctaagcggacgtagaggctgtctccttgcagccgtg
attgctctctctagcgtcatcctttcggctctagctaagcctggcacgtcggtatatctc
gaaaataaccactacgatccggcactgaaggagcttctggccagtggtggcgtctctcta
tgtgccaccgtcgctgtctgttgtggcatcacccctttgctcgaggaattcgtataccgg
ggatttgtcctcacgtctctggctgcgtatgcatctcctccgtgggccattatcaccagc
tcgttgattttctctctggttcacttcaaggcacctgaagagacgctatggcgtgatcaa
cttgtgtccctggcgcacctggtgatgacggagcagccccgggccgaagtaggaaaggcc
gctctgtggcgggcaggggacactgtcggccaccagagatgcgtagcttatgtagagggg
ctgggatgcctgctgctgctgtgctcccagctgctgcacaaggagggcaagaacaagaga
acatactag
DBGET
integrated database retrieval system
