Selaginella moellendorffii: SELMODRAFT_418853
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Entry
SELMODRAFT_418853 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
SELMODRAFT_418853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_418853
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
SELMODRAFT_418853
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
SELMODRAFT_418853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_TPR
FAN1_HTH
Sgf11
TPR_7
Motif
Other DBs
NCBI-GeneID:
9660706
NCBI-ProteinID:
XP_002979258
JGI:
418853
UniProt:
D8S707
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MLRGRESLIRLVGKRQRNVSLPAREELECGDVSLEIKGGLSLACCDWVECPVCGKQIRGN
ELLVNCHLDTCLQRGKKKKNSVQHTLFHFNLSKKVEYEESGNCVLEIQQSPPLETGVDCN
TAAGSPEPEVSSTLECFEEPDVANSVLPAELNSETRDLYNGCLEARIAGRKYHRDVECQA
GMRVHLVREPENPMDTYAVKVLTADGLSLGHIPKELSRYLSPLMDKGVVDVQGYVSESTS
EAARLKLDLREIQSRTIGSLSEEKVLAVKWSRLMDAADKGQDHGCRYQQNFLYMLQVVLE
RDLHLFTPDEIELLEAFRSISSDGQRLFVRLAQRKGPWFRLQNIFYEDIGDTNSAVHELV
ERRYLVFNADVNSSELLEHLTVQELKDLAVNSKIMIKSATLSLKKIQLITAIRDALISLH
FNLTALIREATGPCIRIAETLEVLLWRLQRLFFLNGEQEFHVFLLVDIGRIKYPSYRCAR
TMPVFASREDFLAYEQHPFLARFSAAWVYATICTVAASFLEKERRYAEAINLFKQLLSMQ
YCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFSVRGGDRIALQRRVLRLGKPPRR
WKVPPYAALLKKKQKVVTIMGRPLNNANGMKSRFYGYDGQQCSVEDLALQYYAGEDGGGW
KGVHSESGIWLTLFGLLMWDVIFSDVPDVFQTPFQTAPLDLCTDSFYPVRSSLIESRLQA
IRDGGARQLVAETWAEHYGTSCSGVNWEKYSLEDLQTITVCIGGPGLSVICKLLAEDHSN
WTAGMPDLLLWKEKEARLAEVKGPGDRLSEQQVAWFLILSDANVPVELCKVSKTMNDRS
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgctccggggccgtgagagcttgattcggcttgttgggaagcggcagcgcaatgtgtca
ctcccggctcgggaagagttggagtgcggtgatgtttcgctggaaataaaaggaggcctg
agcttagcttgttgtgactgggtggaatgccctgtgtgtgggaagcaaatacgcgggaat
gaacttctcgtcaactgccatcttgatacttgcctgcaacgtgggaagaaaaagaagaac
agtgtccagcatacactctttcacttcaacttgtcgaaaaaggtagagtatgaggaaagc
ggaaactgcgtactagaaatccagcagtctcctccgctcgagactggggtcgactgtaac
acggcggcagggtctccggaaccggaagtttcttctactcttgaatgctttgaggagccc
gacgtggccaacagcgtccttccggcagagctcaacagtgaaactagagatctttacaat
ggctgcctggaggcaaggattgctggccgcaagtaccacagagacgtcgagtgccaagct
gggatgcgagttcacctggtaagggaaccagaaaatcccatggatacatacgctgtgaag
gtgcttacggcggatgggctttcgctgggacatattccaaaagagctttcgcgttatttg
tctcctctcatggacaaaggcgtggtagacgttcagggatatgtctccgagagtacatcg
gaagctgcacgcctcaagcttgatttgcgtgagatccagagtcggactattggaagtctc
tcagaagaaaaagtgctggctgtcaaatggagccgtctgatggatgcagctgacaaggga
caagaccacggctgtcgataccaacagaattttctctacatgctccaagtggtattggaa
cgggatctccatctctttactccagacgagatcgaacttctcgaggcatttcgttcaatc
tcgtctgatggacagcgcctttttgtaagattggctcaacgaaaggggccatggttccgt
cttcagaacattttctatgaagatattggtgacacaaattctgcagtccatgagttagtc
gagagacgctacttagttttcaacgcggacgtcaattcgtcggagttgcttgaacatctg
actgtacaagagctcaaagatttggcagtgaacagcaaaatcatgatcaaaagtgctacg
ctaagtttgaaaaagattcagcttattacagcaattcgagatgcattaatttcgctgcat
tttaatctaacggctttaattcgtgaagcaaccggcccatgcattcgaatagccgaaaca
cttgaagttctactttggcgtttacagaggctgttctttctaaacggtgagcaggagttc
catgtttttcttcttgtggatattggaaggatcaagtatccaagctataggtgcgctaga
acaatgccagtctttgcttctcgagaggactttctggcgtatgagcagcatccattttta
gcacgattttcggctgcatgggtgtatgcaacaatctgtactgtggctgcatcgtttctg
gagaaagaacgcagatatgctgaagctataaacctcttcaagcagctccttagcatgcag
tattgtcctggacggagaggatactggactctccggctatctattgacttggagcactta
cagcgtttagaagagagcctgctcgttgcagaaaacggattaaatgatttcagcgtccga
ggaggggatcgtattgctttgcaacggagggttctccgactaggaaaacctcctagaagg
tggaaagtacctccatatgcagcgcttttaaagaaaaaacaaaaggtggtgacgattatg
ggaaggccgctaaacaatgccaatggaatgaagagcagattttatggctacgatgggcaa
caatgcagtgtggaggacctggcacttcaatactatgccggagaagatggaggcggctgg
aaaggagtccattcagaaagtggcatatggctgacattgttcgggctgctcatgtgggat
gttatcttttcagacgttccagatgtcttccagacaccttttcagactgcaccattggac
ttgtgcacggattcattctatccagtccgaagctcgcttattgaatctcgtcttcaagcc
atacgcgatggcggagctaggcaactcgtggctgagacttgggcagagcactacgggaca
tcatgtagcggggtaaactgggagaagtactcgcttgaagaccttcaaacaataacggtc
tgtatcggaggtccaggattgtcggtgatttgcaagcttcttgcagaagaccacagtaac
tggacggctggaatgcctgatcttctgctgtggaaggagaaagaggcgaggctggccgaa
gtcaagggtccaggggatcgcttgtccgagcaacaggtggcctggtttctgattctctcg
gacgctaatgttccagtggaactttgcaaggtctccaagacgatgaatgatcgatcctag
DBGET
integrated database retrieval system
