KEGG   Selaginella moellendorffii: SELMODRAFT_418944
Entry
SELMODRAFT_418944 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
smo  Selaginella moellendorffii
Pathway
smo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SELMODRAFT_418944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_418944
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     SELMODRAFT_418944
SSDB
Motif
Pfam: RPC5 DUF4998 LpxC UvrA_inter
Other DBs
NCBI-GeneID: 9660351
NCBI-ProteinID: XP_002979319
JGI: 418944
UniProt: D8S7B0
LinkDB
Position
Unknown
AA seq 625 aa
MDGAGSSVPEEVTMESVADIVEDGDTVVREIEVHITPTADPDTKFYLLQYPLRPYWRPYE
LEQRCEAVRVKHQHQKLEVDLQVDRFGDNYDDAADDHLRIAKQTLTSTQGNLSTNYAIGI
LQGNKLHLNPLHAIVQLRPSLSYLNEADEQKKKNITRVESDDEMPDAEEGAATEKKPEPV
AFKVEIKKQETERQQQSRLMSYAHLKQLEEAEAWITLEPHGLDSPVTKEIKMKMKSSANN
LIRFDMSRNEYMKKLVPGRAPSAAASQAVPGLGKEPLSKSYLDTLPLDKRLHAVLSQGRV
HVLQFERLMKLAPAGCTEEEVLDVLQKTAYLVQGCWVATSNMRYTGGRCAIRDYILLQFV
KNRVVSRETLEQLRVSKEILREILVPLAVQNIKTGGWEFIESTDKTFIKRHNSIAKDQLQ
RWTAGDKLISDRALAVQQMGSGKAMGAKPGSGLAASTGIPPRPSTSSSMAPETLAALPDA
LTQIFLKHHVCTLQFICHCLRESAITKSQADNVKVEEKASAVAAAKGASAPVAELTAIVD
TIATNINGVYFLTQLGDPTQDPFREVVIALLKQKSAGLQRSEIMEAFKLALRKMPSNQLY
QKIMKELCYTRGATWVLKTGDGRPS
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggatggagctggaagcagtgttccagaggaagtgacgatggaatcagtggccgatatc
gtggaggatggagatacagtggtgagagagatcgaggtccatattactcctacagccgat
ccagacaccaagttctatcttctccaatatcctcttcgaccgtattggagaccttacgag
ttggaacaacgatgcgaagcggttcgcgtgaagcaccaacaccagaaactcgaggttgat
cttcaagtcgatcggtttggagacaactatgatgacgccgcggacgaccatctccgaatc
gctaaacagacgttaacttctactcaaggcaacctctcgacgaactatgccattggaatt
ctgcaagggaacaagctccacttgaatccgttgcatgcgattgtccaacttcgtccgtcg
ttgagttatctaaacgaagctgatgagcagaagaaaaaaaatatcactcgcgttgaaagt
gatgacgagatgcccgacgctgaggaaggggctgctactgaaaagaaaccagagcctgtg
gcttttaaggtggaaataaagaaacaagagacagagcgtcagcagcaatctagattgatg
tcatacgcgcatctgaaacaacttgaggaggccgaggcgtggatcacacttgagccgcat
gggttagacagtcctgtaaccaaggaaatcaaaatgaaaatgaagtcctccgcaaacaat
ctcatccgcttcgacatgtctcggaatgaatatatgaagaaactggtccctggtcgtgcg
ccttcggctgcagcgtcacaagccgtgccaggactaggaaaagagcctctctcgaaaagc
tatttggatactttgccgctggacaagagattgcacgctgtcttgtctcagggtcgagta
catgtgctgcaattcgaaagacttatgaagctggctccggcaggttgcacggaggaggaa
gttctggatgttctccaaaaaacagcttatctggtgcaaggctgctgggtggcaacgagt
aatatgcgctacacaggtggtcggtgtgcgattcgagactatatcctcctacagtttgtc
aagaaccgggtggtcagtcgtgaaactctcgagcaactcagggtctctaaggagattttg
cgggagatacttgttcctctcgcagtgcaaaacatcaagacaggcggctgggagttcatc
gaaagcacagacaagacttttatcaagcgtcataactccatcgccaaagatcagctccaa
cgctggactgcaggagataagctcattagcgacagggctctagccgtccaacaaatgggg
tctggcaaggcaatgggtgctaagccaggcagcggccttgcagcaagcacaggcattcca
ccgaggccctcaacttcgtcgagcatggcaccggaaacgcttgctgctctaccggacgca
ctcacgcaaatctttctcaaacaccatgtgtgcacgctgcaattcatctgtcactgcctg
cgtgaatcggcaatcacaaaatctcaagcagacaacgttaaagtcgaggagaaggcctcg
gcagtagcagctgccaaaggagcgtcggcgccagtggccgaactaacagcaattgtggac
accattgcgacgaacatcaacggtgtttacttcctaactcagctcggagatcccactcaa
gacccttttagggaagtggtcatcgcgttactgaagcaaaagtccgctggcttgcaaaga
tcagagatcatggaagcgttcaagctggcgttacgtaaaatgccgtcgaatcaactttac
caaaagataatgaaggaactttgctacacgagaggtgctacttgggtgctgaaaactggc
gatggtcgtccaagctag

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