Selaginella moellendorffii: SELMODRAFT_420136
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Entry
SELMODRAFT_420136 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03504
DNA polymerase delta subunit 3
Organism
smo
Selaginella moellendorffii
Pathway
smo03030
DNA replication
smo03410
Base excision repair
smo03420
Nucleotide excision repair
smo03430
Mismatch repair
smo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SELMODRAFT_420136
03410 Base excision repair
SELMODRAFT_420136
03420 Nucleotide excision repair
SELMODRAFT_420136
03430 Mismatch repair
SELMODRAFT_420136
03440 Homologous recombination
SELMODRAFT_420136
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smo01009
]
SELMODRAFT_420136
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_420136
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_420136
Protein phosphatases and associated proteins [BR:
smo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SELMODRAFT_420136
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
SELMODRAFT_420136
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
SELMODRAFT_420136
MMR (mismatch excision repair)
DNA polymerase delta complex
SELMODRAFT_420136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
9648226
NCBI-ProteinID:
XP_002980528
JGI:
420136
UniProt:
D8SB29
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MADSSSEAGIIEQLRALVSDLSLMVSYKWLSRKFLISSNVAKRLLYKFVEKYGDGLEVLY
SVSGWTQSQPRSYSVKVVKLSQLEGAKALLAEGSSVHIYSIQASVPRDPALVWSPDNVQA
EEFFNQPLDAVNCLRDNRFSGVSCSLVKRDNKGTVSSSAPASEKPSLPLPPKPALMKNET
SIAAKASNGETRTVKQENGEGRRDANKRKEGSTTAQGSSIANLWGRPSNNSKASPPKNDS
PQKPLPGNADACINALEEHENGGSSDDDITNFRRLRRGGQKRRVVLDDEVSELKEEEAAS
EEKEEEEEEQVISLISPEKKIEETKHEDKASNSNSRSGDDKRMDPKKKRKVLRTRIDERG
REVTEVVWDTEEPESSKIEEIEKVKAPNKTAAPPPPPPASKHPASKASTSKVSTKPSSKP
GKKAACGPQQGSITSFFKKK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcgtcctccgaggcggggattatcgagcagctgcgagcgctcgtttcggat
ctgtcgctcatggtctcgtataagtggctgagcaggaagtttcttatttcatccaatgtg
gcaaaacggctgctctacaagtttgtagaaaaatacggggacggcttggaagtcttgtac
tctgtttcgggatggactcaaagccaacctcggagttattctgttaaagtagtcaagcta
tcgcagcttgaaggagccaaagctcttctcgcggaagggtcctccgttcacatctacagc
atccaagcttctgtccctagagatccagcgctggtgtggagtccagacaacgtccaagcc
gaggagttttttaaccagcctctcgatgctgttaattgccttcgtgataacaggtttagc
ggagtatcatgttctctcgtgaaacgggataacaaaggaacagtttccagttctgctcca
gcctctgaaaaaccatcattaccgctgccgcctaaaccagctcttatgaagaatgagacg
agcattgccgcgaaagcttcaaatggtgaaacaaggacggtaaaacaagaaaatggtgaa
ggaaggcgcgatgcaaacaagcgcaaggaagggagtactacagcgcaaggaagctcgata
gccaacttatgggggcgtccatcaaacaattcaaaggcaagtccaccaaagaatgattct
cctcaaaagccattacccggaaatgccgatgcttgcataaatgcactggaagagcatgaa
aacggtggtagcagtgacgacgatattacaaactttcgccgcctcaggcggggtggacag
aagcgaagggttgttctcgacgacgaagtgtcagagctcaaggaagaagaagcagcttcg
gaagaaaaggaagaggaagaagaagaacaagtcatcagcctcatctctccagagaagaaa
atcgaagagacgaagcacgaagataaagcatcaaattcaaactcgaggagcggtgacgat
aaacgcatggaccccaaaaagaagagaaaagtcctcagaacacgcattgatgagcgagga
cgcgaagtgaccgaggttgtctgggatacggaagaacccgaaagctcgaagatagaagag
atagaaaaggtgaaagctcccaacaaaactgctgctccaccaccgccacctccagcaagc
aagcatcctgcttccaaggcctccaccagcaaagtttccacaaaaccttcgtccaagccg
ggcaaaaaagccgcttgcggtcctcaacaaggcagcataacttcgttcttcaagaaaaag
tga
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