Selaginella moellendorffii: SELMODRAFT_420798
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Entry
SELMODRAFT_420798 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08736
DNA mismatch repair protein MSH3
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_420798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_420798
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SELMODRAFT_420798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_III
MutS_V
MutS_II
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
9647217
NCBI-ProteinID:
XP_002981373
JGI:
420798
UniProt:
D8SD56
LinkDB
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Position
Unknown
AA seq
654 aa
AA seq
DB search
MCVVEEAITEHKANAGKDEVKGSFDARFGVVAVETSTGDVMYGHFMDTVTRTELESRLLA
CAPAELLLSASLSTSTKKLLMDYAGAADVRAEKTPENSFENGGTVAALADFYGSLASSKK
GCLDEKVDAGLEALMTMPEIVVAAFAHIFAYLKQFNLENVLRLGALFRPFAGQQEMTLSP
NTIRQLEILHNQTDGTENGSLFWLMNHTKTAFGARLLKYWVAHPLRDRMLISQRLDAVAE
IAESIGDKGRGTTVATLASTLLLLGKLPDLERGITRIYHKTATTYEFINVINAIMKAASQ
FQRVRDARSALLSRLISAVTSTSVIDHANKLVTSLNAEAAAAGDKINLFVAGQYPEVDEC
KETIKSIEEDLESFLPSYRKLLEVFKSGILERLGNVVFGRDWVKINSTKKANRYHPPEVL
EASERMALAKEQLNISCAKAWDMFLTDFTSYHMEFRAAVQALAALDCLDSLAVVSCNQGY
VRPEFVDEACLLKIEGGRHPVLDSTLQDAFVPNDTVVSGEGERSQIITGPKMGGKSCYIG
QVALITIMSQIGSYVPAATAKLHVFDAVFRGDGQNPEGLQGTSTHDGITIAYAMLHHLLQ
EVHTHYLNVTEVVKLFPSQVQAYHMSYLVESLEGDLDKSSGQEVAQKVTFLYKL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttgtggaggaggcaatcaccgagcacaaggccaacgctggaaaggatgaagtg
aagggaagttttgatgctagatttggggtggtggccgtggaaacctcgaccggagacgtg
atgtacggtcactttatggacactgtcaccaggacggaactggaatcacggttgcttgcg
tgtgctcccgcagaacttcttttatctgcgtccttgtccacttctacaaagaagttgttg
atggactatgcaggcgcagcggatgttcgagccgagaagacgcctgagaactcgtttgaa
aatggcggtactgttgctgctcttgcggacttctacgggagcttggcgtcttctaagaaa
ggctgtctggacgagaaggttgatgcagggttagaggcgttgatgacgatgccagaaatc
gtggttgctgcgtttgcgcatatatttgcttatctgaagcagtttaatctggaaaatgta
ttgcgcttaggagctcttttccgaccatttgccgggcagcaagagatgacgctctcgccc
aacaccatccgccagcttgagattctacataaccaaactgatggtactgaaaacggatct
ttattctggcttatgaaccacacaaaaactgcttttggcgcgaggctgcttaagtattgg
gtggcccatccgttaagagaccgcatgcttatttctcaacgtttagacgccgttgcggaa
attgccgaatccattggagataaaggcagaggcacaacagttgcaactttagcttcaacg
ttgttgctgctgggaaaattgcctgatcttgagcgtggtatcacaagaatttatcacaaa
acagcaacaacgtatgagttcattaacgtgattaatgcgattatgaaagcagcgtcccag
tttcaacgggttcgcgacgccaggtctgcgctcctcagcaggctaatctccgcagtgact
tcaacttcagtgatagatcacgcaaacaagcttgtgacaagtttgaatgcagaggcagca
gcagctggggataagattaacttgtttgttgccggccagtatcccgaggtagacgaatgc
aaagagaccataaaaagtattgaggaggatctcgaaagttttcttcccagttatcggaaa
ctgttggaagtgttcaaatctggaatacttgagcgtctcgggaacgtcgtttttggtcga
gattgggttaaaataaacagtacgaaaaaggcaaaccgctatcatcctccggaggtcttg
gaagcatcggaaagaatggcacttgcaaaggagcaattaaatatatcttgcgccaaagca
tgggacatgttcctgactgactttacctcctatcacatggagttccgggctgcagtacag
gcactagcagctctcgactgtcttgattcccttgctgttgtctcgtgcaatcaggggtat
gttcgaccggagttcgtggatgaagcgtgccttttgaagatagaaggtggtcgacatccg
gtcctagattcgactctgcaagatgcatttgtaccaaatgacacagttgtttctggtgag
ggtgaacgatcgcaaataatcactggtccaaaaatgggtggtaaaagttgctacatcggt
caagttgctctaatcacaatcatgtcccagataggatcgtatgttccagccgcgacagcc
aaactgcatgtattcgatgccgtgtttaggggcgatggacagaatccagaggggctccaa
ggaaccagcacacacgacggcatcaccatcgcgtatgcgatgctccatcaccttctccaa
gaggttcatactcactacttgaacgtcacggaggtggtgaagctctttcccagccaggtt
caagcataccatatgtcatatcttgtggagagcctggaaggagaccttgacaaaagctcc
gggcaagaagtggcacaaaaggtgacgttcctctacaagctctag
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