Selaginella moellendorffii: SELMODRAFT_420898
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Entry
SELMODRAFT_420898 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_420898
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
SELMODRAFT_420898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
PDS5
Cohesin_HEAT
PHD
TPR_DNAAF5
Cnd1
INTS1_R4
HEAT_GCN1_C
PHD_2
Motif
Other DBs
NCBI-GeneID:
9647407
NCBI-ProteinID:
XP_002981324
JGI:
420898
UniProt:
D8SDH0
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MEEGDRKTYGLANTAHTEIAQSLPLPSLPIGFGATSQGLSLFEENEHAARLQGARDAAIM
SKAGKIAELLANTDSSYITLKDETSIPPVVAEPGSLAAAVLKFNPQAFSCRSSAPLKAEV
PKAKSQPSSFAARTGPLQNSEDHEEQSTVKKPRLKRKHQHDADHQGKEKRAADSGRREPK
QNGITSGICELLNEFLERSDTHGDPDGEEEGTTLSLQEMKSISEEITSLHAKAAVSKIPS
ERLIKLLNFLDRHVRHAHLKEIDEGDDVESDNFEIVMTALEAVQVTLMIMSSPKMPKQIY
KEEVIDRIIEFTRYQIVHSVFTAYDPLYRQVHKNGGDEDEVDEEEEDEGKRGRRKSRSGK
PKKLTSSRVSTAVSIVLHKLCSILALLKDLLSVEKLLDSTILQLMKTVLGTFGVDNIQLL
QLKAIGVASMVFNIYPQHQTVMIDELLSMLWKLPSSKKNLRTYHLPEEEHKQIQMLVALL
LQLVQCSVALPELRTGQEKASTDTRKCFEPAVSICNYFWRNVFQRWAVPKAQEGSDVKVV
MENLVLDLLATINVPEFPAASLLLQVLCVLLLGPAGVKSKDVPVRVSAIDILGQIAAHLK
RDTVAYSKDNLWILQETQEGPSGFAKDVCTSCGHSKANKFILRCDSCKRWFHGDCVGVTG
QDLIGRGWFCHCCLCRNQLASFDPGSSGKSHDTYKVPEDGAVIVQQILLNFLRETGSGDN
VSFFARRFYLCLWYGYDPQGLQSLAFYHWRWGSKAPHQDFGITSNAISRDIIVRITRALG
QQRPLARGFDRILERLLASLQENASNPRAKALKAVSAIVEVDPGVLADERVQKAVEGRFM
DSAISVREAAMELVGRHIVSRPDVAIKYFDRLSERIMDTGVSVRKRVIKILRDFCLLAGG
FPKATDACIRVISRINDDEASIQDLVCKTFYELWFEEHPGQQTQFVADGSIVPSEIAERV
QQIVDVLKSLPNHQPIVMIIKRSLTLDFIPQGSKTAAPTNISQAAVRNRCELMCKYLMEC
ILKAEETSEDSEVQALPYVSALHAFCIVDPTLCAPASDPSRFAVTLQPYLKTLADNRDIA
QLLQSIVYVIDTVLPLLRRPPQNLVEELERDLRQLIVRCNCGFNPVFVFRCLASLTKISS
KKGVVFDFLVRQFYKVLESWQNSEMIQEKPNILRSLFCLGLFVRYGAELIDGMNDHDVTM
NSVLNLYTHYLQSEDFEVKVKALQAAGFVFLARPDFMMNESIGKVLGDSLISKADTRLKM
QTLRNFYEYLLDVEKQMGLANAKDGESRDATTAVPIAAGAGDSNICGGIIQLHWDRILER
CLDKDEQVRQAAIKVVDAVLRQGLVHPMTCVPQLIALEVDQQEGISKLAHRLLSNLNDKY
PSFFETRLGDGLQLSFTFIQTGATHASRVKNKVDQNEAAFARAGISRIYKLIRGSRNSRN
KFLASVVRKFDWITSQASTSFLMYCTEILVSLPFNLLEEPLYLIFAINRILQVRAGDLEA
SIKAEFQQEPLCGLMKQTAPDATEEGTSIQVPQEVLKHLQVQSDGAVALSLLLKMKRHLK
ITFCLDDARCQAFQPSDPVKSAEVVSRQAAKDFDCTDIFAKQPENVAEVVQRYQLFKSLL
KADTMDYSAYAPPASTRKRGRSSAAADGLYQGNGHAGSKLRRKSAPPAPASDDDGDPDAE
EEHGRTPSKRRKGKSRKP
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggcgataggaagacttacggcctcgccaataccgcgcacacggagattgcg
cagtcgctgccgctgccgagccttccaatcgggtttggagcgacgagccagggattatcg
ctgtttgaggagaatgagcatgcagcgcggctccagggtgctagagatgccgcgatcatg
tccaaggccgggaaaattgcggagcttctcgccaataccgactcgagctacatcaccttg
aaagacgagacatcgattccgcccgttgtggcagagcctggaagcttggcggccgctgtt
cttaagtttaatccccaagcatttagttgccgttcttcagctcccttgaaagctgaggtg
cctaaagcgaagtcacagccatcatctttcgcagcacgtacaggacctttgcaaaactca
gaggatcacgaagagcagtctaccgtaaaaaagcccaggctaaagcgtaagcaccagcat
gatgcggatcatcaaggcaaagaaaagcgggcggcagattctggacgtcgtgaaccgaaa
caaaatggtatcaccagtggaatatgtgagcttttgaacgagttccttgagaggtcagac
actcatggtgatcctgacggtgaagaggaaggaacgaccctgtccctccaagagatgaaa
tcaatctcggaggagatcacctcacttcatgcaaaggctgctgtgtctaagatcccttcc
gagcggcttatcaagcttttaaattttctggaccggcacgtcaggcatgctcatttgaag
gaaatagacgaaggagatgacgtagagtccgacaattttgagattgtcatgaccgcgtta
gaggcggttcaagtaacattgatgatcatgtcctctcctaaaatgcccaagcagatttac
aaggaagaggtcatcgatagaatcatagagttcacgcggtatcagattgtccatagtgtt
tttacggcatatgatcctctttaccgacaagttcataagaatggtggcgacgaagatgaa
gtggacgaggaagaagaagatgaaggaaaaaggggcaggcgaaagagtcgatcagggaag
cctaagaaactgacatcctctagggtgtctactgctgtctctatagttcttcataagctg
tgtagcatacttgcgcttttgaaggacctattatcagtggagaaacttcttgatagtacc
attcttcaactaatgaagactgttctcggcacgtttggtgttgacaatatacaactattg
cagttaaaagcgattggcgttgccagcatggttttcaacatctacccgcagcatcagacg
gtaatgatcgacgagcttttgtccatgttatggaagctcccttcttcgaaaaagaacctg
aggacatatcatctaccagaggaagaacataagcagatacagatgctagtagcattactt
cttcaactggtgcagtgcagcgttgctcttccggaattgagaactggacaggagaaggcc
tctaccgatactagaaaatgctttgaacctgcagttagcatatgcaattacttctggagg
aatgtctttcaacgatgggctgtgccaaaggctcaagaaggttcggatgtcaaagtagtg
atggagaacctagtattggatctgttggcgactataaatgttccggaatttccagctgca
agccttctcctgcaggtgctttgtgtgctgcttttaggccccgcaggggtaaaatccaaa
gatgttccagtccgggtttctgccattgatatcctcggtcaaattgctgcacacttgaaa
agagatacggtggcttatagcaaagataacctttggatactacaggaaactcaggaaggt
cctagcggcttcgcaaaagatgtctgtacaagctgtggtcactcgaaagccaataagttc
atcctgcggtgtgacagttgcaaacggtggtttcacggagattgtgtcggtgttactgga
caagatcttattgggagaggatggttttgtcactgctgtctctgtagaaaccaacttgct
tccttcgacccaggatcgagtggaaagtcccatgatacttacaaagttcctgaagatgga
gcagttatcgttcagcagattctcttgaatttcttacgggaaactggtagcggagacaac
gtctcttttttcgctcggagattttatttgtgcctttggtacgggtatgatccgcaaggg
ttacaaagtcttgctttttaccattggagatggggatcgaaagctccacatcaggacttc
ggaattacgtctaatgccatttctcgagacatcattgttcgcataactagagcactggga
caacagaggccgctagcacgaggatttgatagaattttggagcggcttctggcaagcctg
caggaaaatgcatctaatcctcgagcaaaagctttgaaagcggttagtgcaatcgttgaa
gtcgatcctggagtactagctgatgaaagagtacagaaagccgttgaaggcagatttatg
gattcggctatatccgtgcgagaagctgcgatggaacttgttggccgccacattgtatct
cgtccggatgtagctatcaagtactttgatcggctatctgagcgcattatggacactggt
gtcagtgtgaggaagcgggtcataaaaattcttcgtgatttttgcttattggcgggtgga
tttccaaaagcaaccgatgcatgcatccgtgttatttctcgaatcaatgatgatgaagcc
agcattcaggatctcgtgtgtaagacattttatgaactttggtttgaagagcatcctggg
cagcagactcagtttgttgccgacggaagtattgtcccttctgagattgctgaacgcgta
caacaaatcgtggatgtcttaaaaagtcttccaaaccatcagccgatagtgatgattatc
aagagaagcctaaccttagatttcattcctcaaggttcaaagacggctgctccaaccaat
atttctcaggctgccgtgcgtaatcgatgcgaactcatgtgcaagtaccttatggagtgc
atcctgaaggccgaagagacgtccgaggattcagaggttcaggcgttgccttatgtgtca
gctttgcatgcattctgcatagttgatcctactctttgcgcacctgcttctgatccatca
cggtttgcggtaaccttgcagccatatttgaaaacactggctgataatcgcgatatagcg
cagcttttgcaaagcattgtttatgtaattgatacggttctcccgctactcagaagaccg
cctcaaaatctcgtggaagaactagagcgagatctgcgacagctcattgttcgctgtaac
tgcggttttaatcccgtgtttgtgttcagatgtttggcttccttgacaaaaatctcttcc
aagaaaggagtcgtgtttgatttcctagtccggcaattctacaaagttctcgagtcgtgg
caaaacagtgaaatgattcaagagaagccaaacattcttcgttctttgttttgcctcggg
ttatttgtccggtacggagcagagcttatcgatggcatgaatgaccacgatgttactatg
aatagcgttttaaatttgtacacacactaccttcaaagtgaagattttgaagtcaaggtt
aaggcactacaagcggcaggatttgtgtttctagcgaggccagattttatgatgaacgag
agcattggaaaggttttgggggattcattgatttccaaagctgatacgcgattgaagatg
caaactcttcggaacttttacgagtatctgctcgacgtggaaaaacaaatgggattggca
aatgcgaaggatggcgaaagccgagacgctacaacagctgttcctattgcggcaggggca
ggcgatagtaacatatgtgggggtataattcagctacattgggaccgtatcctggaaagg
tgtctggataaagatgagcaggtcaggcaagctgcgattaaggttgttgatgcagttttg
cgtcagggtttagttcatcccatgacgtgcgtacctcagcttatagcacttgaagtagac
caacaagaaggcatatctaagcttgctcatcgtttgctaagcaatctaaacgacaaatat
ccatcgttctttgaaactcgtcttggcgacggattgcagttgtccttcaccttcattcag
actggtgcaacacacgcttcacgcgtgaaaaacaaagtcgaccaaaacgaggctgctttt
gcgcgcgcaggaatttctcgtatatacaagctcattcgggggtcgcggaactcaagaaac
aagtttttggcatccgtagttcgcaagttcgactggataacatcacaagcatccacatct
tttttgatgtattgcaccgagattcttgtttcattgccgttcaatctgctggaagaacct
ctctatttgatattcgccatcaatcgcattctgcaagtccgagcaggtgaccttgaggcg
agcatcaaagcggagttccaacaggaaccactttgtggtttgatgaagcaaaccgcacca
gatgcaacagaagaaggcacttcaattcaggttccccaagaggtgttgaaacacctacag
gttcagtccgatggggcagtggcgttatctttgcttttaaagatgaaaaggcacttgaaa
atcacgttttgtcttgacgatgctcggtgtcaggccttccaaccctcagatcctgtaaag
tccgcggaggtagtttcaagacaagccgccaaagacttcgattgtactgacatctttgct
aaacaaccggagaatgtggctgaagttgtacaacgctatcagctattcaaatctttgcta
aaagctgacacaatggactactctgcttatgcaccgcctgcttcaacgagaaagaggggt
cgttcctctgcagcggcggatggtctttaccaaggcaacgggcatgccgggagtaagctg
cggaggaaaagtgcgcctcctgctcctgctagtgacgacgatggagatcccgacgcggag
gaagaacatggaagaacgccctcaaagcgaaggaaaggcaagagcagaaaaccatag
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integrated database retrieval system
