Selaginella moellendorffii: SELMODRAFT_421150
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Entry
SELMODRAFT_421150 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_421150
03460 Fanconi anemia pathway
SELMODRAFT_421150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_421150
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
SELMODRAFT_421150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
9648164
NCBI-ProteinID:
XP_002981666
JGI:
421150
UniProt:
D8SEN7
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MDMALPPRIRKLEESVVNRIAAGEVIQRPASALKELLENSLDAGATVVSVIVKDGGLKLI
QITDNGHGIRYEDLPILCERHTTSKITAFEDLQRVSTLGFRGEALASMTFVAHLTVTTMT
EGQTHGYRASYKDGAMEGDPRPCAAVKGTQIMVENLFYNVTARRKSFKNPSDEYARVVDV
ISKYSIQNPKVGFSCKKFGDARADVQTPGNTSALEAIRAVYGPGTSRELIEIKTSKNDSS
DSFEMNGYISSANYSAKRTTMILFINDRLVDCAPLKRAIEVVYAAVLPKASKPYIYMSIR
LPSEHVDVNVHPTKKEVSFLNQESLIEAIQTAVEQELLQSNKSRTFYAQTSLEAAFLPQG
QPRSQAENKSSQKAPVNKLVRTDSQSPAGRMHAFLASGAELKNDLTAMRRIVRQRRHSND
TSGSSSGSSAVERMLAAVDTETHSGLLEIIRHSTFIGMADDVLALIQHKTRLYLMNCLTL
SKELMYQQALVRLRRLNALRLSNPAPVYDLIVMALDEEEQCGNYHATDGSKDGIAQVYCN
QILKRAEFLRECFSIDIDDNGNVCTLPLIVEQHTPDMDRLPLFALHLSKSVDCDVEDECF
EAVARALSEFYALHPPLLPRPSTNPPAVCAESNETEMDEDVGLEAESKWSQRDWTIQHVL
FPAMKLLLKPPVRMATDGTALQVRGFAGIPRRFNFLILRKTIPRSLPLRLLLSLTKWKLN
QGDLNKLKFNPFIYI
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcattgccgccaagaatccgcaagctcgaggagagcgtcgtcaaccggatc
gcggcgggcgaggtgatccagcgccctgcctcggctctcaaggagctcctggagaatagc
ctggacgccggcgccactgtcgtctcggtcatcgtcaaggatgggggattgaagctcatc
cagatcacggacaatgggcatgggatccggtatgaagaccttcctatactctgcgagaga
cacaccacctccaaaatcactgcctttgaggatttgcaaagggttagcacactgggcttc
cgaggggaggctctggcgagtatgactttcgtagctcatctcactgttactacaatgact
gaaggccaaactcatggatacagagcctcgtataaggacggagcgatggaaggcgatcct
cggccttgcgctgctgtgaaaggaacccaaataatggtggaaaatctcttttacaatgtc
acagctagaagaaagtctttcaagaatccaagtgacgagtatgctcgcgttgttgacgtg
atcagcaaatactcgatccaaaatccgaaagtcggattttcgtgtaagaagtttggtgat
gcacgagcagacgtgcaaactcctggcaacacgtcggcgttggaagcaattcgagcagtc
tatggacctgggacctctcgagaacttatcgaaatcaaaacctccaagaacgattcctcg
gactcttttgagatgaacggttacatttcgagtgcaaactacagtgccaagagaacaacc
atgattctgtttataaacgatcgtttggtggactgtgctccactgaagagggcaatcgag
gttgtgtatgcggctgttctaccaaaggcatcaaaaccgtacatttacatgtctattcgc
cttccttcggagcatgttgatgtcaatgttcatccaacaaagaaagaggtgagcttttta
aatcaagagtcgcttatagaagcaatccaaacagcagtcgaacaagaacttttgcagtct
aacaagtctcggacgttttatgctcagacttcgcttgaagcggcatttctgccacaagga
cagcctaggagtcaagcagagaataaaagctctcaaaaggcacctgttaataagcttgtg
aggacggactcgcaaagccccgccggacgaatgcatgctttccttgccagtggagcggag
cttaaaaatgatttaacagccatgcggcgaattgtaaggcaacgacggcactccaacgat
acttctggctcatcttctggctcgtctgcagtcgaacgtatgcttgccgctgtcgataca
gagacacattcaggcctgctcgaaatcataaggcactctacgtttattggaatggcggac
gatgtcttggcgttgatccaacataagacgaggctttatcttatgaactgcttgactctg
agcaaagagttgatgtaccaacaggcactcgtccggcttagacgtctaaatgcactccgg
ctcagcaatcctgcgccagtgtatgacttaatagtcatggctttggacgaggaggaacag
tgtgggaactatcatgctacagatggatctaaggatggaatagctcaggtttactgtaac
cagattttaaagcgtgctgagtttttgcgagagtgtttctcgattgacattgacgataat
gggaacgtttgcacacttcccttgatcgtggagcagcatacgccggacatggacaggctc
cctcttttcgccctgcatctttcgaaaagcgtcgattgtgatgtagaggacgagtgcttt
gaagcggtagcaagggcgctttcggagttttacgctcttcaccctcccttgttaccgaga
ccttcaaccaatcctccggctgtttgcgcagaaagtaatgaaaccgaaatggacgaagat
gtcggtttggaagcagaaagcaaatggtcccagagagactggacgattcagcatgtactc
tttccagccatgaagctgttgctaaaaccaccggtaaggatggcgactgacggtactgca
ctccaggtccgtggatttgctggcatcccgagaaggttcaacttcctgattctcaggaag
acaatcccgagaagtcttccacttagacttctcctgtctctgactaagtggaagttgaac
cagggagacctcaataagctcaaattcaatccatttatatacatataa
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