KEGG   Selaginella moellendorffii: SELMODRAFT_42150
Entry
SELMODRAFT_42150  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_42150
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_42150
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_42150
Enzymes [BR:smo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SELMODRAFT_42150
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     SELMODRAFT_42150
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     SELMODRAFT_42150
Spliceosome [BR:smo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    SELMODRAFT_42150
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    SELMODRAFT_42150
SSDB
Motif
Pfam: DEAD Helicase_C CMS1 Utp25_C ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 9659986
NCBI-ProteinID: XP_002990969
JGI: 42150
UniProt: D8T5S0
LinkDB
Position
Unknown
AA seq 421 aa
VEVSGSDVPAPARSFDDLSLHSILNDNIRQCRFTVPTLVQKYAIPICLAARDLMACAQTG
SGKTAAFCFPIIEGILREPVPGREGRRRVSIPLALILSPTRELAQQASIELSLPISFSFI
ADEAFKFCYQTGVRVGVVYGGTRLWSDNLGGVDILVATPGRLNDLLDREMVELQKLKYLT
LDEADRMLDMGFEPQIRRIVEESGMPGAELRQTLMFSATFPKKIQRLAGEFLRKDYVFLA
IGEVGSSTSRIEQEVIFVQRNQKYDCLGMVIDRQQMHGTKNNVRKTLVFVGTKLKADDLE
IWLRSRGYVAIAIHGDKTQEERRRALKSFKSGSTPLLVATEVASRGIDIPDVSHVINFDL
PTNIDDYVHRIGRTGRAGKRGFATALFCDGDAPLAHKLVHLLESCNQQVPDWLIQKAAES
S
NT seq 1263 nt   +upstreamnt  +downstreamnt
gtcgaggtgagcggatccgatgtcccagcgccagcacggagcttcgacgatctgtcgctc
cattccatcctcaacgacaacatcaggcagtgccggttcacggtgccgacgctcgtccag
aagtacgccattccgatctgcctcgcggctagggatctcatggcgtgcgcgcagacggga
tccgggaagactgccgcattttgcttcccgatcatcgaagggattctcagggagcccgtc
ccaggcagggaagggaggaggagagtttccattcctctggctctcattctttctcctact
cgagagctcgcgcagcaggcaagcatagagctttcactgcccatctctttttccttcata
gccgatgaagctttcaagttttgctaccaaacgggagttcgtgttggagttgtctatgga
ggaacacgactctggagcgataacttgggtggagttgacatacttgtggctacgcccggt
cgtttgaacgatcttttggaccgagagatggtggagctccagaaactcaagtacttgact
ttggacgaagccgatcggatgctggacatgggcttcgagccgcaaatccgacgcattgtg
gaggagtcgggcatgccaggagcggaacttcggcagacgctcatgttcagtgcgactttt
cctaaaaagattcagaggcttgccggggagtttttgcggaaagactatgttttccttgcc
atcggagaagttggctctagtaccagtcgcatcgagcaggaggtcatctttgtccagcgc
aaccagaagtacgactgcctaggaatggtcatagatcgccagcagatgcatggaaccaaa
aacaatgtaagaaaaacgctggtgtttgttggcaccaagctcaaggctgatgatctcgaa
atctggctgcgttccagaggctatgttgccattgcgattcacggagataaaacgcaagag
gaaagaagacgcgccttgaaatctttcaagagtggatccacgccccttctcgttgcaacc
gaagtagcctcccgaggcatcgacatcccggacgtgtcccatgtcatcaacttcgacctc
ccgacgaacatcgacgattacgtgcaccgcatcgggcgaactggacgagcgggcaagaga
ggattcgccacagctctcttctgcgacggggacgctcctctggcgcacaagctcgtccat
ctgctcgagagttgcaaccagcaagtccccgactggttgatccagaaggcggccgagagc
tct

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