Selaginella moellendorffii: SELMODRAFT_421707
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Entry
SELMODRAFT_421707 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SELMODRAFT_421707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_421707
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
SELMODRAFT_421707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
9635971
NCBI-ProteinID:
XP_002982270
JGI:
421707
UniProt:
D8SG44
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MEVIEVENAWPDVDGFHTRIVMETSAIKPPLPLRPALCGDMDPDRSLLSLGGSDFSGGSS
SISRKSVSGASSASKKLCVEVPWRYFEVMYSVKKKNSRKPGPRSDGVLAVQGSSYNLLDN
NGKSISKRKISGKEIKENSSLEVFNFVIEVLDEIPEEEYLSGKIFSTSRPTFPSSEGSDI
TVESARNPGRERLSRPMQILEKDQLVLNMAEVANGAAPVVVDPYIASKLRPHQREGVKFM
YECVMGLRSRTFTGCLLADEMGLGKTVQVIALIWTLLRQGSGGVPAVRRAAVVCPLTLTR
NWGKEVRKWLGSERLKAMVVDCAREAAEKIIDFKNDSFCPLLITSYEILRKHKDIVASTN
LELLICDEAHRLKSCENNQWLSKGNKTIASLASLNCNKRILLVRFCSLHGFLTPGSDWQT
GTPAQNNLSEFYALLDFANPELLGSYNEYKNIYASPIEQSRDRNASHAEKELGSERSEEL
KQMTSFCILRRTSEINKEHLPPKSEYAVFCKLHDVQISLYEIFVKSQFVRTMLNSDIQRA
HVLSAIGALRKLSSHPGLLQSDMKHVTSAEIKNQPFFHRAEELLDLSDVQASLRDVVRHN
WSLSGKFVCLQHLLLATIQCNDRIVVASNFTQTLDLIEAMCNEHSWKFVRLDGGTMISER
QPLVERLVLVDPDWNPANDAQVMSRIWREGQPKPVKIYRLLSTGSIEEKIYQRQIMKKDL
TSFFGDQSTYQPTCKRTNDQKFSRQELRELLKLPSETKCETYDLLCRLNTQLEDKWKDSS
GMLDDHVLQSAVESGVTTFVSADSPQTQQSSGVLERDTGLDCGAC
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgattgaggtggagaacgcctggccggacgtggacggattccacacgcgcatt
gtgatggagacgagcgctatcaagccgccgctcccgctcaggccggcgctgtgcggggat
atggatccggatcgatcgctgctctctctcggcggcagcgattttagcggtggtagcagc
tcgatctcgcggaaatccgtgtcgggagcgtcttcggcgtccaagaagctctgcgtcgag
gtgccatggcgatatttcgaggtcatgtacagcgtcaagaagaaaaactccaggaagcca
gggccgcgatccgatggcgttcttgcggtccagggatcgagctacaatctgctcgacaat
aacggcaagtcgatcagcaaaagaaagatttcgggaaaagaaatcaaagagaattcttct
ctcgaggttttcaactttgtgatcgaagtattggacgagatccccgaggaagagtacctg
agcgggaagatcttctcaacgagcaggcctacctttccttcttccgaaggatcggacatt
actgtcgagtccgctcggaatcctggaagagaaaggctgtctaggccaatgcagattctg
gagaaagaccagcttgtcctcaacatggcagaagttgcaaatggcgctgctccagtcgtt
gttgatccatacatcgcttcaaaacttcgaccgcaccagagggagggagtgaagtttatg
tacgagtgcgtcatgggactgagatctcgcacatttactggctgtctactagctgacgaa
atgggtctcgggaaaactgtgcaagtcattgcactgatttggacgctgcttcgtcagggt
tctggaggagttcccgctgtaaggcgagcagcagttgtttgcccgttgacgctaacccga
aattggggaaaagaggtgcgtaagtggctgggctcggaaaggttgaaagcaatggtcgtc
gactgcgcaagagaggcagcagaaaagataatcgacttcaaaaacgacagcttctgtcct
cttttaatcacgtcgtatgaaatactaaggaagcacaaggatattgttgcctcgacgaat
cttgagcttcttatctgcgatgaagctcatcgactgaaaagctgcgagaacaaccaatgg
ctcagcaagggaaacaaaacgattgcgtcactggcgtcgttgaactgcaacaagaggatt
ttactcgtaagattttgtagccttcacggctttctaacgcctggctctgactggcagact
ggaacacccgcccagaacaacttaagcgagttttatgctttgcttgattttgccaatcca
gagctattgggttcctacaacgagtataagaatatctacgcttctcccattgagcaaagt
cgggatcgcaacgccagccacgctgagaaagaattaggctcagagagatcggaagagcta
aaacaaatgacaagcttttgcattcttcgaaggacatctgagataaacaaggagcacctt
ccaccgaaatcagagtacgccgtgttttgcaaacttcacgatgttcagattagtctttac
gagatatttgtcaagtctcagttcgtacgaaccatgctaaactcagatattcaacgtgcg
cacgttctttctgcaattggagcgctgcgtaaactttcaagccatccggggctgctacag
agtgatatgaagcacgttacgagcgcggaaattaagaatcaaccattttttcatcgcgcc
gaagaattgcttgatctttctgatgtccaagcatccttgagagatgtcgtgaggcacaat
tggagcctatctggaaagttcgtgtgcttacaacatcttcttttagcgactatacaatgc
aacgacagaattgtggtcgcttccaacttcacacaaaccttggacttgatagaggcaatg
tgcaatgaacactcatggaagttcgttcgactggacggtggaaccatgatatcggaaaga
cagccactcgtcgaacggctcgttttagtcgatccagattggaatccagcaaatgacgcg
caggtgatgagtcgaatatggagagaaggccagccgaaaccagtaaaaatatacaggctt
ctgtccactggcagcatcgaggagaagatatatcaacggcaaatcatgaaaaaagatctg
acgtctttctttggtgatcagtccacatatcaacctacctgtaaaagaacgaacgaccag
aagtttagccggcaggaactcagagagcttttgaaattgccttcggaaacaaaatgcgag
acatatgatctactgtgccggctcaacacgcaactggaggacaaatggaaagactcgtca
ggaatgctggatgaccacgtcttacagagcgcggtcgaatcgggagtgactacgttcgtg
tcagctgactcgcctcaaacgcaacaaagcagcggagttctcgaaagagacacaggcttg
gattgtggagcatgttaa
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