Selaginella moellendorffii: SELMODRAFT_421928
Help
Entry
SELMODRAFT_421928 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_421928
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
SELMODRAFT_421928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
GatB_Yqey
Motif
Other DBs
NCBI-GeneID:
9661507
NCBI-ProteinID:
XP_002982504
JGI:
421928
UniProt:
D8SGT1
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MVWCSYCGKDQIAEHNDGFICCTGCGRVLDDNVFSSEPTFAKSASGQSQFVGNIVKQSQY
GTYARIVDDGTGTVSGYQSNSHQRTLDKGRQEIRNIASSLSVGGGDDIVGSAHRIYVLAV
EKNFTKGRRTSQVAAACLYIVCRYLLGAVFLQLCTLLRLDQHPMVQKPVDPSLFIHRFTD
RLLHRIAPGTSSKNQFAIANTALRIVASMKQDWIQTGRRPSGICGAALLLSTRIHGLECS
TADVESVVYVCKATITKRLVEFSNTEAGSLTPEEFEAKAKQREKEMLSVSQTDIVNNGVI
KEILCEHKDSGAQHYAHGLCKNCYDDFVKISGGLQGGSAPPAFQRAQKERERLLKNKKRK
LTAEAISDEDEDLTCTNSSPVAEKAIKKKLEQEEHSYFDADDVTESCVTHETKAEKRYED
SVDDEPESLSDIDDEQEAKEAALKAQAESMAAVSTSGTAAEIAAATVVMSRKARKHKHGD
TANCKPAESAAEATRQMLEKKRLSSKLNYSVLEKMFNGKEDSPSKWVEEPPGKTEPADTK
VPPEEEHDQEGNENENEHENENEAELENDIPSYSYIYEQAVEEDYEEY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtgtagctactgtggcaaggaccagattgccgagcacaacgatggattcata
tgctgtactgggtgtgggagagtgctcgatgacaatgtcttctcctccgagccgaccttc
gcgaaatcggcgtctggacagagccaattcgttgggaacattgtcaagcaatcacagtat
ggaacttacgctcgcatcgtcgacgatggcaccgggaccgtctcgggctaccagtcgaat
tctcatcagagaacgctggacaaaggcaggcaggagattcgaaacatagcgagctcgctc
tcagttggcggtggcgatgatatcgttggttccgcgcataggatttatgtcttagccgtg
gagaaaaactttacgaaaggaaggagaacatctcaagtcgccgcagcatgcctctacatt
gtttgcagatatttgctaggagcagtttttctccaactatgtaccctactgagattagat
cagcatccaatggttcaaaagcctgtggatccaagtctgtttatccatcgtttcacggac
cgacttctacacagaatagcaccagggacttcctccaaaaatcaatttgccattgcaaat
actgcacttaggatagtagctagcatgaagcaagattggattcagacgggtaggagaccc
agcgggatctgtggagctgctttacttttatcaactcgaattcatggtttggaatgctcg
acagcggatgtggaaagcgtcgtttacgtttgcaaggctacgataaccaagcggcttgta
gagtttagcaacacagaagctggtagcctaactccagaagaatttgaagcgaaggctaaa
caacgagagaaagagatgctgtccgtttcccagactgatattgtaaataacggggttatt
aaggaaattctttgcgagcacaaggactcgggagctcaacactacgcacatggactctgc
aaaaactgctatgacgatttcgtcaagatttctggtggattacaaggaggatctgcaccc
ccggcctttcaaagagcccagaaagagcgggagagactattgaagaacaaaaagagaaag
ctgaccgctgaggccatctcagacgaggacgaagatttgacatgcacaaacagctctcca
gtcgctgaaaaagctatcaagaaaaagctggaacaagaggaacacagttactttgacgct
gacgatgtgaccgagagttgtgtcacacacgaaacgaaggccgaaaagcgatacgaagac
agtgtggacgacgaaccggagtcactatctgatatcgacgacgagcaagaagccaaggag
gcagcactcaaggcgcaagctgagtccatggctgccgtgtcgacgtcaggaactgctgca
gagattgccgcagctacagtagtgatgtccagaaaggctagaaaacacaagcatggtgat
actgcaaactgcaagcccgcggaatcagcagccgaggcaaccagacaaatgctagagaaa
aagagactgagctccaagctgaactatagtgtgctggagaagatgtttaacggcaaggag
gattcgccatcaaaatgggtcgaagagcctccgggaaagaccgagccagccgacaccaaa
gtcccaccggaagaagaacacgatcaggaaggaaacgaaaacgaaaacgagcacgaaaac
gagaacgaagccgagctggagaacgatatcccgagctatagctacatttacgaacaggcc
gtggaagaggactacgaagagtactag
DBGET
integrated database retrieval system