Selaginella moellendorffii: SELMODRAFT_423685
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Entry
SELMODRAFT_423685 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_423685
Enzymes [BR:
smo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SELMODRAFT_423685
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SELMODRAFT_423685
Prokaryotic type
SELMODRAFT_423685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
9644607
NCBI-ProteinID:
XP_002984447
JGI:
423685
UniProt:
D8SMI2
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MEEKDVGILCFANSFPGFRAVLKQRYSDFIVNEVDLDGNVVRLTSLTAPPEDETRSDAAA
AEFSVASYEAQLDAFKELAGEENARIVKQLLDKISPEKSDDGNSLVETLTPNEDKGSRTK
VHAFFRERMPMLITDTVADNRIRVRYGGGSASDDRSGKRNRSWKGKRGHDSKRQRQDGDK
FDRRAGNYWPADRHKFCQFYLYKENKTTQSALMIVAQKIGVKAKNMGFAGTKDKRAVTTQ
RVTVYKHSATQLAALNKALFGIKLGNFSYVEKGLVLGELSGNRFNVILRDVVAESEHAIK
EAAEGMGNSGFINYYGLQQQAAEESRKIFKTAGPAEALKLMPHHMIAERAILLGLKKDPA
NYLQAIQNIPRPMRMMYVHSYQSYLWNSAASTRIQKYGNPLLSFSNGVKDVAFTGVDAVV
EGDLVYCQEDEISKEAGKDDVDLEDLVDTDVLEDDACMELARPSRKKVKHVTAEDIASKK
YAITDVVLPLVGSTTVYPSNDVADVYNKITKMESIDLKSCTHNVKEFSVEYLTGAYRNLL
VKPIDFEWRLSSYSDARNPLTKTDMDLLQDPSTSLPEEDANSTQGPSLLALQLQFTLPTS
AYATMAIREVMKMSTSVSVHKLLSQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaggatgttgggattttgtgcttcgcgaattccttccccggttttagagct
gttctcaagcaaaggtactccgacttcatcgttaacgaggtggatctcgatggcaatgtg
gtgcgattgacgagcttaacagcgccaccagaggatgaaacccggagtgatgccgctgcc
gcggagttttccgtggcttcatacgaagcacagctcgatgctttcaaggaactcgccggc
gaggagaatgcccgtattgtcaagcagctccttgacaagatttctccggaaaagtccgat
gatggcaactcactggtggaaactctcacgccaaacgaggataaaggcagccgcacgaaa
gttcacgcgttctttcgggagagaatgccgatgcttataactgatactgtggcggacaat
cgcattcgcgtgagatacggtggcggctcagcttctgacgatcgatctgggaaaaggaat
cgaagctggaaaggaaagcgaggccatgactcgaagcgacagagacaagacggtgacaag
tttgatcgtcgcgcaggaaactactggccagctgatagacacaagttttgccagttttac
ctatacaaagagaacaagactacgcagtcggctttgatgattgtagctcagaagattggc
gtaaaggcaaagaacatgggttttgcggggacgaaagataagcgtgcagtaacaacgcag
cgggtcactgtttacaagcattcagcaacacaactcgcagcacttaacaaagccttgttt
ggtatcaagctaggaaactttagctacgttgagaagggcttagttcttggagagctttct
ggaaatcgcttcaacgtgattttgcgtgatgtcgttgcagagtccgagcatgcgatcaag
gaagcagctgagggcatggggaactctggttttatcaactactatggcttgcagcagcaa
gcagctgaggaatctcgtaagatcttcaagactgctggtcctgccgaggccttaaagctc
atgccgcaccatatgattgccgaaagagccattcttcttggcttgaaaaaggatcctgca
aactacctacaggccatccaaaacattcccaggccaatgcggatgatgtacgtccacagc
taccaaagctatttgtggaacagcgctgcaagcacgaggatacaaaaatatggtaatcca
cttttgtcattctcaaacggtgtcaaagacgtagcttttacaggggtggatgctgttgtg
gaaggtgatctcgtctactgtcaagaggatgagatttctaaagaagccgggaaagatgat
gtggatcttgaggatctcgtagacacggacgtcctagaggatgacgcttgcatggaactc
gctcgcccatctcggaagaaagtaaagcatgtcacagcggaagatatcgcctcgaagaag
tatgcgataaccgacgtggtcttgcctttagtcggttccaccactgtttatccatcaaac
gatgtggccgatgtctacaataaaatcacgaaaatggaatcaatagatttgaagtcttgt
acacacaacgtgaaagagttctcggtggagtatttgacaggagcatatcgaaacttactc
gtgaagcctatcgacttcgagtggagattatcctcgtacagcgacgcccggaatcctctg
acgaaaacggacatggatttgctccaagatcctagcactagccttccagaagaagatgca
aactccactcaaggccccagccttctggcattgcagctgcaattcactctcccaacgtcg
gcctatgctacaatggcgataagagaggtcatgaaaatgtccacgtcggtctccgtgcat
aagctgctatcacagtag
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