Selaginella moellendorffii: SELMODRAFT_424054
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Entry
SELMODRAFT_424054 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_424054
Enzymes [BR:
smo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SELMODRAFT_424054
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SELMODRAFT_424054
Prokaryotic type
Methylthiotransferases
SELMODRAFT_424054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
DUF6741
Motif
Other DBs
NCBI-GeneID:
9648770
NCBI-ProteinID:
XP_002985034
JGI:
424054
UniProt:
D8SNN2
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MAISDSPQRADLWLINTCTVKAPTMETLIRKGKAASIPLVDSWMRSSGFKRSRSCQRHRS
AANTAGETLKGHEAWLLRRDALPSLDLPKVCKNKFVEIIPINVGCLGACTYCKTKHARGH
LGSYTVDTLVQRLKTVVSEGRDIGANIPALLCALVAALPHRQKYNAPNLHLTASGGNGCH
PCVYSFLHVLVQSGRDSVLEGMKREYTFSEFRKIVDTLTRLVPEIHIATDVICGFPGETS
EDFDRIMELIREYTFPQVHISQFYPRPVFILSISLDRNTGGSNETGSNARSEEMKPFLDK
SVRIVHSLRRNGGKTYRVWVTNTAADGIHLVGLCTSSTSSCTRPSWKQMVCDWRVANQIP
LLETMLRKSDVSSGSEAAGFVVTLVAFFTHSRRKQAQEFLATLAQTRLGATGSSNQSPIS
AIPDETVCGRNSSAQVKPTYQDGWCISTARYCCLEALAFYISRTDTHFLSASLLPKLHGR
LNLYDLEGVCLDDGVTGMKIWKKFLSPSTWFLAMERKLLQQQQQPPTQAAPATATARGLP
TPAAAAAAAPAGQPAVPRPASSDRHSEHLGQHLPPKAPALWLVVAQPVSTASRPAAAQQH
HPRQQPPRDLQKC
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccatctcggactctcctcagagagctgatctttggctgatcaacacgtgtactgtg
aaagctccgacaatggaaacactgatacgtaaaggcaaagcagcctctattcccttggtg
gatagctggatgcgttcctcagggtttaaaagatctcgaagctgtcagcgtcatcggagt
gcagcaaatacagcgggggagactttgaaaggccacgaggcctggctgcttcgacgggat
gctttaccgtctcttgatttgccaaaagtttgtaagaacaagtttgtcgagatcattcct
atcaacgttggctgcttgggtgcttgcacatactgcaagacgaagcatgctcgcgggcat
cttggcagctacacagtagacacactagtgcaaagattgaaaaccgtggtgtctgaagga
cgagacattggagcaaatataccagcgcttctatgtgctttagttgccgcgcttcctcat
agacagaagtacaatgctccgaatctacatcttacagcatctggaggaaatggctgtcac
ccctgcgtgtattcgttccttcatgttctggttcaatctggaagggactcggtgttggag
ggcatgaagagggagtacacgttttccgagtttagaaaaattgtggatactctcacaaga
ctagtcccggagattcatatcgctacagatgttatctgtggatttccaggagaaacatca
gaggattttgacaggatcatggaactaatacgagagtacacgttcccacaggtccacata
tcacagttttaccctcgaccagtgtttatcctgtcaatatccttagacaggaacaccggc
ggctctaatgaaacgggttccaacgctcgaagtgaagaaatgaagccgttccttgacaag
tctgttcgaatcgttcactccttacgcaggaatggaggtaaaacgtaccgagtctgggtc
accaacactgctgctgatggaattcatctggttggcctgtgtacaagttctacttccagc
tgtacccggccttcttggaagcaaatggtctgtgactggcgagtggcgaaccagattcca
ctcctggagacgatgctgagaaagtcggatgtgagcagcggatcagaagcggcgggcttt
gtggtgactcttgtggctttctttacacactccagaagaaaacaagctcaagaattccta
gcaacgcttgcacaaactcgactgggtgcaactgggagctccaaccagagtccaatctcc
gctatcccagacgagactgtctgtgggagaaattcatcggctcaggtcaagccaacttac
caagatggctggtgcataagcacagcacgctactgttgtctcgaagcactcgcgttttat
atttcacgaacagatacacatttcctatctgcctcacttctgccaaagcttcacggcagg
ttgaatctgtacgacctggaaggtgtgtgtttggatgatggagtcactgggatgaaaatc
tggaagaaatttctaagtcctagcacttggtttttggcaatggagaggaagctgctccag
cagcagcagcagccgccgacgcaggcagcgccagccactgcaacagcccgcggcctgcca
acaccagcagctgctgcggctgctgctccagccggccagccagccgtgccacggccggcc
tccagcgaccgccacagcgagcacttgggccagcacttgccgcccaaagcgccagccctg
tggctcgtcgtggcccagcccgttagcactgcgtcccggccagctgctgcccagcagcac
cacccgaggcagcaaccaccaagggatctccaaaaatgctaa
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