Selaginella moellendorffii: SELMODRAFT_424176
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Entry
SELMODRAFT_424176 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
smo
Selaginella moellendorffii
Pathway
smo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
SELMODRAFT_424176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_424176
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
SELMODRAFT_424176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
Motif
Other DBs
NCBI-GeneID:
9649103
NCBI-ProteinID:
XP_002985023
JGI:
424176
UniProt:
D8SP25
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MAPAAGSKKKTKSKRSGVGIDFKKVKHKVGRKIPAPQNATKVEFKSKSAFLLSSMLFILL
LKSRDALMGIKDLFSRHPKELECNAITTIQKLTSRFTDGDKAVRHALLLVLRETFSSVSK
SVMKPIVSIVMAHLGTAMTHMANDIRLDAFAFLDLLLQHYSSLLIPMYTSQIFDHYNHFL
GFGGSHNFDPNATLTVVGSLTRVLSVVSTSGSSDTTCTIGTCHRWSQKYDLQTLRPLHGY
NSIAADISEKSFATSSVDSSGSGTKWIDISASLVDALLKCWAELAPTVCSSPLPDAVSLD
CMVSITRCLCLLFEWLERSPESCQMKMELRHRFLLPCSSRLMASFPMSAPAVRTIAKIEE
CLCALNAGICETILHFVVAGLHDFDFTNVLQYYEGALLGKLLSLSLFSFSASHNKALDPY
IKSLLAFAPLVFDYADINWKFKAITNAFDRSTPESSIKLGCLTAMSKILLSESQDRKETQ
APSVAEQFSKKWLVSFPRLLWELKCNQLASSKIVLEMLLRLGKFAVAGSTLATDFGMLQS
AMIPFFCTVLPAKETPDKYLYGPFIKLPRDCQEIAVDVLYYFSGFQPFFLKALLACCLSP
DMDLQTLVRLLEVVRVSFVQGRVEVANFFSFLLTLVVECSHAHETAEERKKHWIILGVVS
RSLFQIGDIDVVMHLLAKPMSEHLSARPSPMLLASSLKVLATLSHDVEHVEVPELLLSVL
VAQTASFAVSRLLAKDQMVMVIVRNAVDLVFKNKRWQRSSLCCGSFDERNMQAKSDPEAP
QVFRC
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggccgctgggagcaagaagaagaccaagagcaagcggtccggcgttggaatc
gacttcaagaaagtgaagcacaaggttggtcggaagatccctgctcctcagaacgcgact
aaggtcgagtttaagtcgaagagtgcgtttcttctgtcctctatgctcttcattttgctg
ctaaaatccagagacgctttgatgggaataaaggatttgttctcgaggcatcccaaggag
ctcgaatgcaatgccataactacgatccagaaactgacttctcgttttactgatggggac
aaagctgtgagacatgcgttattgttggtgctacgagaaacattttccagcgtttcgaag
agtgttatgaagcccattgtttccatagtgatggctcacttggggactgctatgacacat
atggcaaacgatattcgtttagacgcgtttgcctttctcgatctcttgcttcagcactat
tcatcattactaattcctatgtacactagccagatatttgaccattataaccatttcctt
ggtttcggtggctcgcataacttcgatccaaatgcaacgcttacggttgtaggcagctta
acacgcgtcttatccgttgtaagcacttctggctcgtccgacacaacttgtacgattgga
acgtgtcataggtggtcgcaaaagtacgacttacagacgctgaggccgttgcatgggtac
aacagcatcgctgctgacatctcagagaaatctttcgctacaagctctgtcgattctagc
ggttccggcacgaaatggattgacataagcgcttcattagtggacgcccttctaaaatgc
tgggctgaactggcgccaaccgtctgctccagtccgttgcctgatgccgtgagcctggat
tgcatggtttcaataaccagatgcctatgtctactttttgagtggctagaacgctcgccg
gagagttgtcagatgaagatggagctgagacacaggtttcttttgccatgctcgagtcga
ctaatggccagttttccaatgtcagctcctgcagttcgaaccattgccaagattgaagaa
tgcttgtgtgcactcaatgccgggatatgcgagacgatcttgcactttgttgttgctgga
ttgcacgacttcgattttactaacgtcctgcagtattacgagggtgctttgctaggaaag
ctgctgtcgttgtccctgttctcgttttctgcgagccacaacaaagcattggatccctac
ataaaatccttgctagcatttgctcctcttgtgtttgactatgctgacattaactggaag
ttcaaagccataacaaatgctttcgatcgcagcactccagaatctagtattaaacttgga
tgccttactgcaatgtccaaaattctcctttcagaaagtcaggaccgtaaagaaacccaa
gctccctctgttgctgagcagttcagtaagaaatggctggtgtcatttcccaggcttctt
tgggagctcaagtgtaatcaacttgcgtcttcaaagattgttctagagatgctactccgc
cttggaaagtttgcagtagctggctctactttagcaacagattttggaatgcttcaatcg
gcaatgataccgtttttctgcactgtgttgccagccaaggaaacgccagacaagtatttg
tacggtccgtttattaagcttcctagggactgccaagagattgcggtcgacgtattgtac
tacttcagcggcttccaacctttctttctcaaagcactgttagcttgctgtctgtctccg
gacatggatctgcaaactttggtccgtttgttggaagtggtgcgagtgtcctttgttcaa
ggtcgggttgaagttgcaaactttttcagtttccttcttacgctggtggtggagtgctcg
catgcacacgaaactgctgaagagagaaagaaacactggataatactgggtgtggtgtcc
cgtagcctattccagattggagatatcgacgtagttatgcatttgttggccaagccaatg
tccgaacatctgtcggctcggccttccccaatgttgttagctagttcactaaaagttctg
gctactctgagccacgatgtggaacatgtggaggtccctgagttgctattgagcgttctg
gtggcgcaaaccgcgagctttgcggtttcaagacttctggctaaagaccaaatggtgatg
gttattgttcgcaatgcggtggacttagttttcaagaacaagaggtggcaaagatcaagt
ttatgctgtgggagttttgacgaacgaaatatgcaagcaaaaagcgatccagaagcacct
caagttttcagatgttag
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