KEGG   Selaginella moellendorffii: SELMODRAFT_42421
Entry
SELMODRAFT_42421  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
smo  Selaginella moellendorffii
Pathway
smo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    SELMODRAFT_42421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smo04121]
    SELMODRAFT_42421
Enzymes [BR:smo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     SELMODRAFT_42421
Ubiquitin system [BR:smo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    SELMODRAFT_42421
  Multi subunit type E3
   ERAD complex
    SELMODRAFT_42421
   LMBR1L-GP78-UBAC2 complex
    SELMODRAFT_42421
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf-C3HC4_2 zf-C3HC4_3 zf-ANAPC11 zf-RING_11 zf-RING_5 CUE zf-RING_16 zf-C3HC4_4 E3_UbLigase_EDD SOG2 Prok-RING_4 RINGv zf-HC5HC2H PHD
Other DBs
NCBI-GeneID: 9642489
NCBI-ProteinID: XP_002986983
JGI: 42421
UniProt: D8SUG4
LinkDB
Position
Unknown
AA seq 534 aa
LQSLLQSSLTIVLLANLLVNFFVVLALCMKTIFFGTLTLLETQKVVERMINYVLFKGLFL
TWVVQPEMMQIALWLAWFAVLGFLKMFQGLARDRLDRLNASPTATVYAHLRVFSVLVLVL
LSDLFWIQLCLVVFKDTGISTFMLLLFEPLSIAFETLQAVLVHGVQLLDTWQRQSLDTSP
AATNGLQPSSDRSVAGASWEWKGMIVRNFSFGMDLLSLFLALGHCLHIWWLRGLAFQVVD
AILFLNLRALLSAILKRIKGFMRMRTAMSTLQGALPDATQEELLAYDDDCAICKEPMVKA
KRLPCAHLFHLSCLRSWLDQGLADTYSCPTCRRPLFMGNLRTLGRSHQSFTRTSQHNAAS
LWRGSGSDSEWTTVAAGQSSSSDNAASNSRGLGRLELMVRHFSGSGSSHARQSPGEGSAS
SAPRGLSRIELIMRQLSSTRNHQQSSSSSSSSPPSSTTWGFWPFSSSSGASPSLQPHQVE
AGSTPATSITDGLTPQMRSMVGMVREVLPHVSDDRIVQELRRTNCVTATVNNLL
NT seq 1605 nt   +upstreamnt  +downstreamnt
ctccaatcgctgcttcagtcgtctctcacaatcgtgctgctggccaatctcctcgtcaac
ttcttcgttgttctagctctttgtatgaagactattttctttggtactcttacgctcctg
gagactcagaaagtcgtggaacggatgatcaactacgtccttttcaagggactctttctc
acctgggttgtccagcccgagatgatgcaaatagctctctggctcgcgtggttcgccgtg
cttggtttccttaagatgttccaaggtcttgcgagggatcgcttggaccgtttaaatgct
tctccaactgcgacagtctatgctcatctgcgtgttttctcggtgcttgtcctggtttta
ctttcggacttgttctggattcaattgtgtctcgtggttttcaaggacacgggaataagc
actttcatgctacttttgttcgaaccgctgagcattgcgtttgagacgttgcaggctgtt
ttagttcatggggtgcaactattggatacatggcagcgtcagtccttagacacttctccc
gctgcaacgaatggtttgcagccatcatctgatcgatcagtcgcaggtgcgtcgtgggag
tggaagggaatgatagttcgtaacttcagctttggcatggaccttttgagcttgttcttg
gctttgggacactgccttcatatctggtggctgaggggccttgcctttcaagttgtcgat
gccattctgtttctcaacctccgggcacttctaagtgcaatcctcaaacgaattaaggga
tttatgaggatgcgcacggccatgagcacgttgcaaggagcgttgccggacgccacgcaa
gaggaactcctggcgtatgacgacgactgcgctatttgtaaagagccaatggtgaaagcg
aagagacttccatgcgctcatctgttccacctctcttgcctgcgttcatggctagatcaa
ggcctcgcagacacatactcatgtccaacttgtcgaaggccccttttcatgggaaatcta
agaactctgggacgttcccaccagagcttcacgagaacgagccaacacaatgcggcgagt
ttgtggagaggttctggatctgattcggaatggacgacggtggcagctgggcagtcctcc
tcctctgacaacgccgcttcaaactctcgaggcctcggaaggctagagttgatggtgcga
cacttctccggttccgggagctctcacgcccgtcaatcgccaggagaaggctcggcatca
tcagctccacggggcctcagccggatcgagcttataatgcggcagctatcgtccacacga
aaccatcaacaaagctcttcctcttcctcctcctcgccaccttcttctaccacttggggc
ttctggcctttctcttcctcctctggcgcgtcgccaagtttacaacctcaccaggtggaa
gctggatccactccggctacttccattacagatggtctcacgcctcagatgagaagcatg
gtgggcatggtgagagaagttcttccgcatgtctcggacgatcgtatcgtccaggagttg
agacgaaccaactgtgtaactgctactgtaaacaacctcttgtga

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