Selaginella moellendorffii: SELMODRAFT_424620
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Entry
SELMODRAFT_424620 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03257
translation initiation factor 4A
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_424620
03012 Translation factors [BR:
smo03012
]
SELMODRAFT_424620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_424620
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SELMODRAFT_424620
mRNA cycle factors
Stress granule specific factors
SELMODRAFT_424620
Translation factors [BR:
smo03012
]
Eukaryotic type
Initiation factors
eIF-4
SELMODRAFT_424620
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SELMODRAFT_424620
Exosomal proteins of bladder cancer cells
SELMODRAFT_424620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADH_zinc_N
UVR
LIF-R_Ig-like
Motif
Other DBs
NCBI-GeneID:
9653784
NCBI-ProteinID:
XP_002985590
JGI:
424620
UniProt:
D8SQI1
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MDIFVVESDTVEVPNNDVDFCCTENAEVEEDRPGRFTAPLMRVYDAKVAINSSFCPKSAL
TFGAMAPIYHASCDFEEALAAAASRSSESGMHVTLVVTSAAKIPLLLQLLRSRAISNCWG
LLWRKTVFSTSSCMNHNVVIFPFFLRNHEYHGVFRSSTLSIRPWQPGVSAMKGWVDPRDR
SSVKGELRSSLEETLPEVLSCSDLGDSWFDSAVESFAGGDSIVQQDWSAILSYMPGVFRR
LARGDESGCSHGPVHARHFGLPEELVGLQAASRVAVGSPERFHASNRLSDVSQLILVEAE
KLFASHRPEVEWIVERLDEDVQIGLHSETLSPEVEDLTSRFAEGRRWERLDKAGASIDGV
RQFYARVDDESCKLDELCRLCKELRRRFKVQVANSSARVMEVAEEMRERGLSAFGIHSGM
GEREVELIKRSEQRSVIVTDHGCSKGARDVINFEMPLSPEDYFERASKLRDQVTKVVISL
VVGGQEYELLDRVTSLYGVDIDLLPSQPKRYLYYDVVM
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacatttttgtggtcgagtccgacactgttgaggttcccaataacgatgttgatttc
tgctgcactgagaatgcagaggtagaggaagataggccgggccgcttcacggcgccattg
atgagggtgtacgatgcaaaggtggcaataaactcttccttttgccctaaatcggccctt
acgtttggggccatggcgccaatttatcacgcaagctgcgattttgaggaagctctagct
gcggctgccagtcgcagcagcgaatcaggcatgcatgtgacccttgtggtcacgagcgcg
gccaaaatcccattgttgttgcaactcctgcgctcccgagcaatctctaattgttggggg
ctgctgtggcgcaaaaccgttttctccacgagctcttgtatgaatcacaacgtcgtaatc
ttcccgtttttcctgcgcaaccacgagtaccatggtgtctttcggagctctacactgtcc
atcaggccgtggcagcccggcgtgagcgcaatgaagggctgggtggatcccagggaccgc
tccagtgtcaagggggagctgcgttcctccttggaggaaactctaccagaagtgctgtct
tgctctgaccttggagactcgtggtttgactcagctgtggaaagctttgccggtggtgac
agcatagtgcagcaggactggtccgcgattctgagctacatgcctggcgttttccgtcgc
cttgctcgcggagatgaatcgggctgctcgcatggccctgttcatgctcgtcacttcgga
ctgccggaagagctggttggcctccaagcggccagccgagttgccgttggttcccccgag
agatttcacgcaagcaacaggttgagcgacgtcagccagctcatactggtcgaggcggaa
aagctctttgcgtcacacaggcccgaggtggagtggatcgtggagcggctggacgaggat
gtccagatcggtttgcactcggagacgctgtctcctgaggtggaagacttgacgtcgagg
tttgccgagggccgtcggtgggaaaggctagacaaggccggcgccagcatagatggcgtc
cgccagttctacgctcgcgtggacgatgagagctgcaaactagacgaactatgccggctg
tgcaaagagctgaggcggcgcttcaaagtccaggtggcgaacagcagtgccagggtgatg
gaggtggcggaggagatgagggagcggggcttgtccgcgtttgggattcacagcggcatg
ggcgagagggaggtggagcttatcaagcggagcgagcaaaggtccgtgatcgtcacagat
catggctgctccaagggggctcgagatgtgatcaactttgagatgccactgtctcccgag
gactactttgagcgtgcttccaagctccgggaccaggtgaccaaagtggtgattagtctt
gttgtgggggggcaagagtatgagctactggatcgcgtgacgagtctgtatggggtcgac
atagatttgctgccttctcagcccaagagatacctgtattatgatgtagtaatgtga
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