Selaginella moellendorffii: SELMODRAFT_425248
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Entry
SELMODRAFT_425248 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SELMODRAFT_425248
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SELMODRAFT_425248
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
9649231
NCBI-ProteinID:
XP_002986362
JGI:
425248
UniProt:
D8SSH4
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MSCNRVPGGGCQGPDVRLIDRGSHVILDNGIVEVTISRPGGIVTGIRFGGIDNLLEIHNK
ETNRGYWDLNWNEPGGKDTFDVDGDKVELSFLRPYIPGTKMLPLNIDKRFVLLRGNTGFY
TYGIYERPAGWPDFNLNQTRVTFKLRKDRFQFMAMADTKQRLMPSPDDRLQQHCTQLAYP
EAVLIHTSQNPEFRGEVDDKYQYSCDNRENRVHGWISCNPALGFWIITASDEFRNGGPLK
QNLTSHVGPTCLAMFHSAHYAGAALCPEFRNGEAWTKVFGPVFIYLNVAATHAQVNCRYL
WEDAKQQMVTEVGSWPVPWPVSPDFPKSMDRGSISGRLLVKDRFASPTPFAGCYAFLGLA
SPGDKGSWQTESKGYQFWAQADAEGYFHVKHVRAGKYDLYGWVPGVLGDYKKEGSIDVHP
GSWLQLGHIVYEPPRDGPTVWEIGIPDRTAAEFHIPDPNPKYINRLFVNHSERYRHYGLW
ERYSELYPEGDLVFTIGKSDWRSDWFFAHTCRIEKDGSVKPSTWQIRFHLPCVQGGVYKL
RLAFAASNNAAIQVRVNDPNTRTTVFDTMQFGKDNAIARHGIHGLYHLWNVDARSELFRA
GENILYLTQRKPTSPIVGVMYDYIRLEAPVRAFNKKKDDPGGRFGIKVLEVNHHYITPER
VPHRSIKKSVCSTDAAAVGWEGSDGPWPVSKDVGGIMQCGWG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcaatcgcgttcccgggggcggatgccagggtcccgatgtgcggcttatcgat
cgcggcagccatgtgattctggacaacgggattgtcgaggtgacgatctcgaggcctggg
ggcattgtgacggggattcgcttcgggggcattgataatctgctcgagattcacaacaag
gagaccaatcgcggctactgggacctcaactggaacgagcctggaggcaaggacactttc
gatgtcgatggtgacaaggtggaactttcgtttctgcggccttacattccgggaactaag
atgcttcctcttaacatcgacaaaagatttgttcttctccgtggcaacactggattttac
acttacggaatctacgagaggccggctggatggccagacttcaaccttaatcaaacacgg
gtgacttttaaactccggaaggacaggttccagttcatggcaatggccgatacaaaacag
cggctaatgccatcgccggatgatcgcttgcagcaacactgcacgcagctagcttatccc
gaggctgttttgattcacacttctcaaaatcctgagtttcgaggtgaggtggatgacaaa
tatcaatattcttgtgataacagggagaacagagtacatggttggatctcatgcaacccc
gctctaggcttctggataatcaccgccagtgacgagttccgcaatggagggcctttgaaa
caaaatttgacttcacacgttggcccgacatgtctcgctatgtttcacagtgcacattac
gctggcgcagccctgtgcccagagtttcgcaatggggaagcctggactaaagtttttgga
ccggttttcatatatttgaatgtagcggcaactcatgctcaggtgaattgtcgctatctt
tgggaggatgcaaagcagcagatggttacagaagtggggtcgtggcctgttccctggcct
gtgtctccagattttcccaaatcaatggaccgcggaagcatttcaggaagactactagtc
aaagatagattcgcgtcaccaaccccatttgcgggatgttatgcctttcttggcttagct
tcccccggtgacaaaggttcgtggcaaacggagagcaagggctaccaattttgggcccag
gctgatgcggagggatatttccacgtcaagcatgtcagagcaggcaaatatgatctgtat
ggctgggtgcctggtgtcctgggtgactacaaaaaggaaggcagcatagatgtccatccc
gggtcatggttgcaactgggacatatagtttatgaaccgcccagggatggaccgacagtc
tgggagattggaattcccgatcgaacagctgccgagtttcacattccggatccgaaccca
aagtatatcaataggctttttgtcaaccattcggaaagatatcgacattatggcctgtgg
gagcggtactcggagctatacccagaaggtgatcttgtgttcaccattggtaaaagcgat
tggagatctgattggttctttgcacatacttgccgaattgaaaaggatggtagcgtcaaa
ccatcgacttggcagatccggtttcatctgccctgcgtccaaggcggggtttataagctc
cggttagctttcgcggcatcaaacaatgcagccattcaggtcagagttaatgaccccaat
acaaggaccacggtatttgacacgatgcaatttggcaaggacaatgcaatagcacgccat
ggaatccatggcctctaccacctttggaatgtggacgcgaggtcggagttattcagagcc
ggtgaaaacattctctacttgacgcagcgcaagccaacaagtcccattgtgggggttatg
tatgactacatccgtcttgaggcacctgttcgtgcttttaacaagaaaaaggatgatccg
ggtggaagatttggaattaaggtgcttgaggtcaatcaccactatataactcccgagcgc
gttcctcaccggagcataaaaaagagcgtttgctccactgacgctgcggccgtgggatgg
gaaggatccgacggcccctggcccgtctcaaaagacgtgggtggcatcatgcaatgtgga
tgggggtaa
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