Selaginella moellendorffii: SELMODRAFT_426715
Help
Entry
SELMODRAFT_426715 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
SELMODRAFT_426715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_426715
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
SELMODRAFT_426715
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
SELMODRAFT_426715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HIRAN
FAN1_TPR
FAN1_HTH
VRR_NUC
TPR_7
Motif
Other DBs
NCBI-GeneID:
9656049
NCBI-ProteinID:
XP_002987972
JGI:
426715
UniProt:
D8SX94
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MLGSGSAMCHSRTLRRLGYLPAKWEEKKHSVQHTLFHFNLSKKIEYEESGNCVLEIQQSP
PLETGVDCNTAAGSPKPEVSSTLECFEEPDVANSVLPAELNSETRDLYNGCLEASIAGRK
YHRDVECQAGMRVHLVREPENPMDTYAVKVLTADGLSLGHIPKELSRYLSPLMDKGVVDV
QGYVSESTSEAARLKLDLREIQSRTIGSLSEEKVLAVKWSRLMDAADKGQDHGCRYQQNF
LYILQVVLERDLHLFTPDEIELLEAFRSISSDGQRLFVRLAQRKGPWFRLQNIFYEDIGD
TNSAVHELVERRYLVFDADVNSSELLEHLTVQELKDLAVNSKIMQVIIGFLYKREILGGS
NLTALIREATGPCIRIAETVDVLLWRLQRLFFLNGEQEFHVFLLVDIGRIKHPSYRCART
MPVFASREDFLAYEQSKHPFLARFSAAWVYATICTVAASFLEKERRYAEAVNLFKQLLSM
QYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLSDFNVRGGDRIALQRRVLRLGKPPR
RWKVPPYAALLKKKHKVHYGTSCSGVNWEKYSLEDLQTITVCIGGPGLSAICKLLAEDHS
NWTAGMPDLLRGKAGGSQGSRGSLVRATGHHVLAFLASATRFSSHRTRNRMFREVENLDR
LVKMPKVGICDSRMCIADEKFYEMVFFCVRTVEVYWESEEEAAGGITMLQGRESLIRVVG
KRQRSVSLQDAPPAQVDRWFVLSRYLPAKWEEKLVPDVVQTHFRDCTIGLVHGFLSIQSE
ARLLNLLFKPYAMVELGNSSWKHSGRKTEEKGAKLVEAKGPGDCLSDLILLDARLACYA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaagcggcagcgcaatgtgtcactccaggacgctccgccggctcggatacttg
cctgcaaagtgggaagaaaagaagcacagtgtccagcatacactctttcacttcaacttg
tcgaaaaagatagagtacgaggaaagcggaaactgcgtactagaaatccagcagtctcct
ccgctcgagactggggtcgactgtaacacggcggcagggtctccaaaaccggaagtttct
tctactcttgaatgctttgaggagcccgacgtggccaacagcgtccttccggcagagctc
aacagtgaaactagagatctttacaatggctgcctggaggcaagcattgctggccgcaag
taccacagagacgtcgagtgccaagctgggatgcgagttcacctggtaagggaaccagaa
aatcccatggatacatacgctgtgaaggtgcttacggcggatgggctttctctgggacat
attccaaaagagctttcgcgttatttgtctcctctcatggacaaaggcgtggtagacgtt
cagggatatgtctccgagagtacatcggaagctgcacgcctcaagcttgatttgcgtgag
atccagagtcggactattggaagtctctcagaagaaaaagtgctggctgtcaaatggagc
cgtctgatggatgcagctgacaagggacaagaccacggctgtcgataccaacagaatttt
ctctacattctccaagtggtattggaacgggatctccatctctttactccagacgagatc
gaacttctcgaggcatttcgttcaatctcgtctgatggacagcgcctttttgtaagattg
gctcaacgaaaggggccatggttccgtcttcagaacatcttctatgaagatattggtgac
acaaattctgcagtccatgagttagtcgagagacgctacttagttttcgacgcggacgtc
aattcgtctgagttgcttgaacatctgactgtacaagagctcaaagatttggcagtgaac
agcaaaatcatgcaagtgatcattggttttttatacaagcgtgaaatacttggcggcagt
aatctaacggctttaattcgtgaagcaaccgggccatgcattcgaatagccgaaacagtt
gacgttctactttggcgtttacagaggctgttctttctaaacggtgagcaggagttccat
gtttttcttcttgtggatattggaaggatcaagcatccaagctataggtgcgctagaaca
atgccagtcttcgcttctcgagaggactttctggcgtatgagcagagcaagcatccattt
ttagcacgattttcggctgcatgggtgtatgcaacaatctgtactgtggctgcatcgttt
ctggagaaagaacgcagatacgctgaagctgtaaacctcttcaagcagctccttagcatg
cagtattgtcctggacggagaggatactggactctccggctatctattgacttggagcac
ttacagcgtttagaagagagcctgctcgttgcagaaaacggattaagcgatttcaacgtc
cgaggaggggatcgtatcgctttgcaacggagggttctccgactaggaaaacctcctaga
aggtggaaagtacctccatatgcagcgcttttaaagaaaaaacacaaggtgcactacggg
acatcatgtagcggggtaaactgggagaagtactcgcttgaagaccttcaaacaataacg
gtctgtatcggaggtccaggattgtcggcgatttgcaagcttcttgcagaagaccacagt
aactggacggctggaatgcctgatcttctaagaggcaaagctggcggaagtcaagggtcc
aggggatcgcttgtccgagcaacaggtcaccacgtcctggctttcctcgcatcagcaacg
cgattttcttcgcatagaacccgtaataggatgttccgagaagtggaaaaccttgatcgc
ctcgtcaagatgcccaaagtgggcatatgtgatagcagaatgtgcattgccgatgaaaag
ttctatgaaatggtttttttctgtgtgcgtacggttgaggtctattgggagagcgaggag
gaagcggccggtggcattacaatgctccagggccgcgagagcttgattcgggttgtaggg
aagcggcaacgcagtgtgtcactccaggacgctccgccagctcaggttgatcgctggttt
gtcttgtccagatacttgcctgccaagtgggaagaaaaactcgttccagatgtcgtccag
acacacttcagagactgcaccattggacttgtgcatggatttctttctatccagtccgaa
gctcgcttattgaatctccttttcaagccatatgcgatggtggagctaggcaactcgtcg
tggaagcactctgggaggaagactgaggagaaaggggcaaagctggtcgaagccaagggt
ccgggagattgcttgtccgatcttattctcttggatgccaggctggcatgctatgcatga
DBGET
integrated database retrieval system
