Selaginella moellendorffii: SELMODRAFT_426728
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Entry
SELMODRAFT_426728 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
SELMODRAFT_426728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_426728
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
SELMODRAFT_426728
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
SELMODRAFT_426728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Sgf11
Motif
Other DBs
NCBI-GeneID:
9656055
NCBI-ProteinID:
XP_002987927
JGI:
426728
UniProt:
D8SXA6
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MLRGRESLIRLVGKRQRNVSLPAREELECGDVSLEIKGGLSLACCDWVECPVCGKQIRGN
ELLVNCHLDTCLQSGKKKKNNVQHTLFHFNLSKKIEYEESGNCVLEIQQSPPLETGVDCN
TAAGSPKPEVSSTLECFEEPDVANSVLPAERYLSPLMEKGVVDVQGYVSESTLEAARLKL
DLREIQNRTIGSLSEEKVLAVKWSRLMDAADKGQDRGCQYQQNFLYMLQVVLERDLHLFT
PDEIELLEAFRSISSDGQRLGSTKGGTLLSFRRDVNSSELLEHLTVRELKDLAVNSKIMI
KSAMLSLKKIQLITAIRDALISLHFNLTALIREATGPCIRIAETVEVLLWHLQRLFFLNG
EQEFHVFLLVDIGRIKYPGYRCARTMPVFSSREDFLAYEQHPFLARFSAAWVYATTVAAS
FLEKERRYAEAVNLFKQLLSMQYCPGRRGYWTLRQSIDLEHLQRLEESLLVAENGLNDFN
VRGGDRIALQRRVLRLDIWPSATTLFLKVTIMGRPLNNANGMKSRFYGYDGQQCSVEDLA
LQYYAGEDGGGWKGVHFRLTAPLDLCTDSFYPVRSSLIESRLQAIRDGGARQLVAETWAE
HYGTSCSGVNWEKYSLEDLQTITVCIGGPGLSVICKLLAEDHNLAGVMHVSARAKPEQLV
AAFASSLCPIGAYVLTIVVQDEPNTGGFECRALGPKLYLLANRDCTIGLVHGFLSIQSEA
RLLNLLFKPYAMVELGNSSWKHSGRVNWENEDLHTITGLSVIHMLLAENQGGQNWSKPRV
REIACPSNRHSHNWWHLELCHLEGGPAENVLRIFDTRIWGDHERAERDTFAVSLNALEFL
LCLQVNRFGDHITKLFVDKIASALYKYGSGNESAISSLLGSNFSARELKIDNGIFTI
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgctccggggccgtgagagcttgattcggcttgttgggaagcggcagcgcaatgtgtca
ctcccagctcgggaagagttggagtgcggtgatgtttcactggaaataaaaggaggcctg
agcttagcttgttgtgactgggtggaatgccctgtgtgtgggaagcaaatacgcgggaat
gaacttctcgtcaactgccatcttgatacttgcctgcaaagtgggaagaaaaagaagaac
aatgtccagcatacactctttcacttcaacttgtcgaaaaagatagagtacgaggaaagt
ggaaactgcgtactagaaatccagcagtctcctccgctcgagactggggtcgactgtaac
acggcggcagggtctccgaaaccggaagtttcttctactcttgaatgctttgaggagccc
gacgtggccaacagcgtccttccagcagagcgttatttgtctcctctcatggaaaaaggc
gtggtagacgttcagggatatgtctccgagagtacattggaagctgcacgcctcaagctt
gatttgcgtgagatccagaatcggactattggaagtctctcagaagaaaaagtgctggct
gtcaaatggagccgtctgatggatgcagctgataagggacaagaccgcggctgtcaatac
caacagaattttctctacatgctccaagtggtattggaacgggatctccatctctttact
ccagacgagatcgaacttctcgaggcatttcgttcaatctcgtctgatggacagcgcctt
ggctcaacgaaaggagggacgctacttagttttcgacgtgacgtgaattcgtctgagtta
cttgaacatctgactgtacgggagctcaaagatttggcagttaacagcaaaatcatgatc
aaaagtgctatgctaagtttgaaaaagattcagcttattacagcaattcgagatgcattg
atttcgctgcattttaatctaacggctttaattcgtgaagcaaccggcccatgcattcga
atagccgaaacagttgaagttctactttggcatttacagaggctgttctttctaaacggt
gagcaggagttccatgtttttcttcttgtggatattggaaggatcaagtatccaggctat
aggtgcgctagaacaatgccagttttttcttctcgagaggactttctggcgtatgagcag
catccatttttagcacgattttcggctgcatgggtgtatgcaacaactgtggctgcatct
tttctggagaaagaacgcagatacgctgaagctgtaaacctcttcaagcagctccttagc
atgcagtattgtcctggacggagaggatactggactctccggcaatctattgacttggag
cacttacagcgtttagaagagagcctgctcgttgcagaaaacggattaaacgatttcaac
gtccgaggaggggatcgtatcgctttgcaacggagggttctccgactagatatttggcct
tcagctacaactctgtttctgaaggtgacgattatgggaaggccgctaaacaatgccaat
ggaatgaagagcagattttatggctacgatgggcaacaatgcagtgtggaggacctggca
cttcaatactatgccggagaagatggaggcggctggaaaggagtccatttcagactgact
gcaccattggacttgtgcacggattcattctatccagtccgaagctcgcttattgaatct
cgtcttcaagccatacgcgatggcggagctaggcaactcgtggctgagacttgggcagag
cactacgggacatcatgtagcggggtaaactgggagaagtactcgcttgaagaccttcaa
acaataacggtctgtatcggaggtccaggattgtcggtgatttgcaagcttcttgcagaa
gaccacaatttggctggcgtgatgcatgtctcggcccgagccaagccagaacagctcgtt
gcggcatttgcctcgtcattatgcccaatcggggcatatgtgctcactattgtcgtccag
gatgagcccaacacgggaggattcgagtgcagggctctgggtcccaaactctatctcctt
gcaaatcgagactgcaccattggacttgtgcatggatttctttctatccagtccgaagct
cgcttattgaatctcctcttcaagccatatgcgatggtggagctaggcaactcgtcgtgg
aagcactctgggagggttaactgggagaatgaagacctccacacaattacgggattgtca
gtgattcatatgcttcttgcagaaaaccaaggagggcaaaactggtcgaagccaagggtc
cgggagattgcttgtccgagcaacaggcatagtcataactggtggcatttagagctttgt
catctagagggtggtccagctgagaacgtgctacgcatatttgacacccgtatatgggga
gaccacgaaagagctgaaagggatacatttgcggtgagcttaaacgcgttggaatttttg
ctgtgtcttcaagtaaacagatttggagatcacatcacgaagctctttgtggacaagatt
gcttcggcattgtacaagtatggctccggcaatgaaagtgctatctcttcactcttggga
tcaaactttagtgctagggagctcaagattgataatggaatattcactatataa
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