Selaginella moellendorffii: SELMODRAFT_426730
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Entry
SELMODRAFT_426730 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
SELMODRAFT_426730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_426730
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
SELMODRAFT_426730
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
SELMODRAFT_426730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
HIRAN
TPR_7
Motif
Other DBs
NCBI-GeneID:
9656056
NCBI-ProteinID:
XP_002987928
JGI:
426730
UniProt:
D8SXA8
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MRVHLVREPENPMDTYAVKVLTADGLSLGHIPKEHSRYFSPLMDKGVVDVQGYVSESTSE
AARLKLDFREIQSRTIGSLSEEKVLAVKWSRLMDAADKGQDHGCRYQQNFLYMLQVVLER
DLHLFTPDEIELLEAFRSISSDGQRLFVRLAQRKGPWFRLQNIFYEDIGDTNSAVHELVE
RRYLVFNADVNSSELLEHLTVQELKDLAVNSKIMIKSATLSLKKIQLITAIRDALISLHF
NLTALIREATGPCIRIAETLEVLLWRLQRLFFLNGEQEFHVFLLVDIGRIKYPSYRCART
MPVFASREDFLAYEQHPFLARFSAAWVHATICTVAASFLEKERRYAEAVNLLKQLLSMQY
CPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFNVRGGDRVALQRRVLRLGKPPRRW
KVPPYAALLKKKHKVVRIMGRPLNNANGMKSRFYGYDGQQCSVEDLALQYYAGEDGGGWK
GVHSESGIWLTLFGLLMWDVIFSDVPDFFQTPFQTAPLDLCTDSFYPVRSSLIESRLQAI
RDGGARQLVAETWAEHYGTSCSGVNWENSLEDLQTITVCIGGPGLSVICKLLAEDHSNWT
AGMPDLLLWKEKEAKLAEVKGPGDRLSEQQVAWFLILSDANVPVELCKVSKTMNDRS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttcacctggtaagggaaccagaaaatcccatggatacatacgctgtgaaggtg
cttacagcggatgggctttcgctgggacatattccaaaagagcattcgcgttatttttct
cctctcatggacaaaggcgtggtagacgttcagggatatgtctccgagagtacatctgaa
gctgcacgcctcaagcttgatttccgtgagatccagagtcggactattggaagtctctca
gaagaaaaagtgctggctgtcaaatggagccgtctgatggatgcagctgacaagggacaa
gaccacggctgtcgataccaacagaattttctctacatgctccaagtggtattggaacgg
gatctccatctctttactccagacgagatcgaacttctcgaggcatttcgttcaatctcg
tctgatggacagcgcctttttgtaagattggctcaacgaaaggggccatggttccgtctt
cagaacattttctatgaagatattggtgacacaaattctgcagtccatgagttagtcgag
agacgctacttagttttcaacgcggacgtcaattcgtctgagttgcttgaacatctgact
gtacaagagctcaaagatttggcagtgaacagcaaaatcatgatcaaaagtgctacgcta
agtttgaaaaagattcagcttattacagcaattcgagatgcattgatttcgctgcatttt
aatctaacggctttaattcgtgaagcaaccggcccatgcattcgaatagccgaaacactt
gaagttctactttggcgtttacagaggctgttctttctaaacggtgagcaggagttccat
gtttttcttcttgtggatattggaaggatcaagtatccaagctataggtgcgctagaaca
atgccagtctttgcttctcgagaggactttctggcgtatgagcagcatccatttttagca
cggttttcggctgcatgggtgcatgcaacaatctgtactgtggctgcatcgtttctggag
aaagaacgcagatacgctgaagctgtaaacctcttgaagcagctccttagcatgcagtat
tgtcctggacggagaggatactggactctccggctatctattgacttggagcacttacag
cgtttagaagagagcctgctcgttgcagaaaacggattaaatgatttcaacgtccgagga
ggggatcgtgtcgctttgcaacggagggttctccgactaggaaaacctcctagaaggtgg
aaagtacctccatatgcagcgcttttaaagaaaaaacacaaggtggtgaggattatggga
aggccgctaaacaatgccaatggaatgaagagcagattttatggctacgatgggcaacaa
tgcagtgtggaggacctggcacttcagtactatgccggagaagatggaggcggctggaaa
ggagtccattcagaaagcggcatatggctgacattgttcgggctgctcatgtgggatgtt
atcttttcagacgttccagatttcttccagacaccttttcagactgcaccattggacttg
tgcacggattcattctatccagtccgaagctcgcttattgaatctcgtcttcaagccata
cgcgatggcggagctaggcaactcgtggctgagacttgggcagagcactacgggacatca
tgtagcggggtaaactgggagaactcgcttgaagaccttcaaacaataacggtctgtatc
ggaggtccaggattgtcggtgatttgcaagcttcttgcagaagaccacagtaactggacg
gctggaatgcctgatcttctgctgtggaaggagaaagaggcaaagctggccgaagtcaag
ggtccaggggatcgcttgtccgagcaacaggtggcctggtttcttattctctcggacgct
aatgttccagtggaactttgcaaggtctccaagacgatgaatgatcgatcctag
DBGET
integrated database retrieval system
